DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2Bdelta and GCD2

DIOPT Version :9

Sequence 1:NP_611790.1 Gene:eIF2Bdelta / 37706 FlyBaseID:FBgn0034858 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_011597.1 Gene:GCD2 / 852974 SGDID:S000003315 Length:651 Species:Saccharomyces cerevisiae


Alignment Length:672 Identity:181/672 - (26%)
Similarity:278/672 - (41%) Gaps:148/672 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 MAEREAK-KLAKQAKKQKTAPTPTAATPAVLTTPSAPATKIIT--EVEQTTITTKLTTTTTTKVQ 130
            |:|.||| :.|....|.|.| |||       ||.:|...|.:|  |:::.....|.......|..
Yeast     1 MSESEAKSRSATPPSKAKQA-TPT-------TTAAANGEKKLTNKELKELKKQEKAAKRAAMKQA 57

  Fly   131 DAVASKTTQPAAVNGKDAEAGEKTREQIKAEREAKKAAKKAGKGGGAK-------VEGIAQQLAD 188
            :.::.:..|..|...|:.:..::.::| |.|::.|.|.||.......|       :|...::.|.
Yeast    58 NGISIEQQQQQAQMKKEKKQLQREQQQ-KREQKQKNANKKKQNERNVKKSTLFGHLETTEERRAT 121

  Fly   189 LKVAEKA----------------PVAASA--------------------------APSTTEADQE 211
            :.....|                ||.|||                          ||::|.....
Yeast   122 ILALTSAVSSPKTSRITAAGLMVPVVASALSGSNVLTASSLMPVGPNASSTVSASAPASTTTTLP 186

  Fly   212 KKKPALSKAERRAIQEAQRAAKAQVQTKKAQHAAKAPPSAAPKG------PNRKSVSPTTAATSS 270
            ....|||.....|......|.:.::.:..|...||...|.:.:.      |...||.||....|.
Yeast   187 ASSAALSAGTSSASTNTPTAIQQEIASSNASDVAKTLASISLEAGEFNVIPGISSVIPTVLEQSF 251

  Fly   271 SPVKCPASTPNVDCRVKLFNHLVCAKEDSQFINDPLVHPSIARLGVQYAKRTVVGSNARCIAFLH 335
            .                  |..:.:......:|..|:||||..|....|...:|||..||||.|.
Yeast   252 D------------------NSSLISSVKELLLNKDLIHPSILLLTSHLAHYKIVGSIPRCIAMLE 298

  Fly   336 ALRQVVHDFETPAKKEFGRSLDAAVKHHVDHLHKCRPLAVSVSNAYKQFKNQLTQLPADVPETES 400
            ..:.|:.|::||......|:|.:.:.|.:|.|.|.|||:|::.||.:..|.:::.:....|:..:
Yeast   299 VFQIVIKDYQTPKGTTLSRNLTSYLSHQIDLLKKARPLSVTMGNAIRWLKQEISLIDPSTPDKAA 363

  Fly   401 KELLVHFIDTYIENQIGKAAQAISGFLQEKITDGDVLLTFACSS-LIQFICEEAKRRQVAFRVIV 464
            |:.|...|..:.:.:|..|.|.|......:|.:...::|:..|. |.:.:...|...:...:|||
Yeast   364 KKDLCEKIGQFAKEKIELADQLIIDNASTQIEESTTIVTYGSSKVLTELLLHNAISLKKNIKVIV 428

  Fly   465 VDSRPGCEGQELLRRLHATGIPCTYVLINAVGYVM-AEATKVLLGAHALLANGYVMARTGTAQVA 528
            |||||..||:::...|...|:...|.||.::..:. .:...|.||||::|:||::.:|.|||.:|
Yeast   429 VDSRPLFEGRKMAETLRNAGVNVMYALITSLDTIFNMDVDYVFLGAHSILSNGFLYSRAGTAMLA 493

  Fly   529 LVANAHNVPVLVCCETHKFSERFQTDAIVYNELSDPNQLV----------RGDKCQLSN------ 577
            :.|...|:|||||||:.|||:|.|.|::.:|||:|||.||          ||:|..|.|      
Yeast   494 MSAKRRNIPVLVCCESLKFSQRVQLDSVTFNELADPNDLVNIDYENPVERRGNKGALLNQFIKER 558

  Fly   578 ---------------------------------------------WAAKGKLLPLNLSYDITPPE 597
                                                         |.....|..:|:.||:||||
Yeast   559 KFEKKKLAMENKPKGNKIGGKKGSEGESKDASNEEDSNSKNILDGWQELPSLNIVNILYDLTPPE 623

  Fly   598 LVSAVVTEVAILPCTSVPVILR 619
            .:..|:||...||.:|||||||
Yeast   624 YIKKVITEFGALPPSSVPVILR 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2BdeltaNP_611790.1 GCD2 306..619 CDD:224105 120/375 (32%)
IF-2B 323..611 CDD:279362 107/350 (31%)
GCD2NP_011597.1 PHA03255 120..>232 CDD:165513 19/111 (17%)
IF-2B 285..637 CDD:395798 107/351 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346307
Domainoid 1 1.000 173 1.000 Domainoid score I753
eggNOG 1 0.900 - - E1_COG1184
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 203 1.000 Inparanoid score I845
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54388
OrthoFinder 1 1.000 - - FOG0003475
OrthoInspector 1 1.000 - - oto99865
orthoMCL 1 0.900 - - OOG6_101847
Panther 1 1.100 - - LDO PTHR10233
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R373
SonicParanoid 1 1.000 - - X2839
TreeFam 1 0.960 - -
1413.790

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