DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2Bdelta and Eif2b1

DIOPT Version :9

Sequence 1:NP_611790.1 Gene:eIF2Bdelta / 37706 FlyBaseID:FBgn0034858 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_742026.1 Gene:Eif2b1 / 64514 RGDID:620819 Length:305 Species:Rattus norvegicus


Alignment Length:305 Identity:72/305 - (23%)
Similarity:146/305 - (47%) Gaps:21/305 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   316 VQYAKRTVVG--SNARCIAFLHALRQVVHDFETPAKKEFGRSLDAAVKHHVDHLHKCRPL--AVS 376
            ::|.|..:.|  :.|..:|.:..|.:.:       |::.|.::.....|....:.....:  :|:
  Rat     7 IKYFKSQMKGDPNMASAVAAIQTLLEFL-------KRDKGETIQGLRAHLTKAIETLCAVDSSVA 64

  Fly   377 VSNAYKQFKNQLTQLPADVPE-TESKELLVHFIDTYIENQIGKAAQAISGFLQEKITDGDVLLTF 440
            ||:..:.|...::....:..: ::.|::::...:.:: ::|..:...|:......|.||..:||.
  Rat    65 VSSGGELFLRFISLTSLEYSDYSKCKKIMIERGELFL-SRISLSRTKIASLCHAFIKDGARILTH 128

  Fly   441 ACSSLIQFICEEAKRRQVAFRVIVVDSRPGCEGQELLRRLHATGIPCTYVLINAVGYVMAEATKV 505
            |.|.::..:.|||...:..|.|.:.:|:|...|:::.:.|....:|.|.||..||||:|.:...|
  Rat   129 AYSRVVLRVLEEAVAAKKRFSVYITESQPDLSGKKMAKALCHLNVPVTVVLDAAVGYIMEKVDLV 193

  Fly   506 LLGAHALLANGYVMARTGTAQVALVANAHNVPVLVCCETHKFSERFQTDAIVYNELSDPNQL-VR 569
            ::||..::.||.::.:.||.|:|:.|.|.|.|..|..|:.||...|.     .|:...|::. .:
  Rat   194 IVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVVAESFKFVRLFP-----LNQQDVPDKFKYK 253

  Fly   570 GDKCQLSNWAAKGKLLPLNLSYDITPPELVSAVVTEVAILPCTSV 614
            .|  .|.:..|...|...:...|.|.|.|::.:.|::.:|..::|
  Rat   254 AD--TLKSVQAGQDLKEEHPWVDYTSPSLITLLFTDLGVLTPSAV 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2BdeltaNP_611790.1 GCD2 306..619 CDD:224105 72/305 (24%)
IF-2B 323..611 CDD:279362 69/293 (24%)
Eif2b1NP_742026.1 GCD2 5..305 CDD:224105 72/305 (24%)
IF-2B 17..293 CDD:279362 68/290 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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