DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30414 and grass

DIOPT Version :10

Sequence 1:NP_611789.2 Gene:CG30414 / 37705 FlyBaseID:FBgn0050414 Length:305 Species:Drosophila melanogaster
Sequence 2:NP_651543.1 Gene:grass / 43273 FlyBaseID:FBgn0039494 Length:377 Species:Drosophila melanogaster


Alignment Length:287 Identity:85/287 - (29%)
Similarity:136/287 - (47%) Gaps:47/287 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 CGTTKPEFIPM-ITGGADAGLFSNPWMV----KVLGEK--LCGGSLITSRFVLTAAHCIVSTH-- 85
            ||    .|:.. ::.|.:..|.|.|||.    :..||.  ||||::|:.|::||||||:....  
  Fly   111 CG----NFLSQRVSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILTAAHCVHGLQND 171

  Fly    86 -MRVRLGEYKTRFPGKDCSRCVPKSYKLRRIRLGEYDTRFPG-KDCCVPKSYELAVDRKILHADY 148
             ..:||||::..                     .|.|.|..| |..|.|....:.:::.::|..|
  Fly   172 LYEIRLGEHRIS---------------------TEEDCRQQGRKKKCAPPVVNVGIEKHLIHEKY 215

  Fly   149 NL-NLDNDIGLLRMKSFVQYSDYVRPICLLVEGHMAES----PIFNITGWGVTNDGTPSRRLQRA 208
            :. ::.:||.||::...|.:..:::||||.:...:.|.    ..:.:||||.|.:|:.|..|.:|
  Fly   216 DARHIMHDIALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTTENGSSSDVLLQA 280

  Fly   209 TVYNTDLHFCRSKFTKQVDESQICAAGTN-SDACHGDSGGPLSAQVPFAGSWL--TFQYGLVSYG 270
            .|.......|...:.:.|..||:|..|.: .|:|.|||||||.|...:.|.:.  ..::|:||.|
  Fly   281 NVPLQPRSACSQAYRRAVPLSQLCVGGGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQG 345

  Fly   271 SAACHSFS---VYTNVTHHRDWIVNAI 294
            ...|...|   :||||..:..||.:.:
  Fly   346 VVTCGQISLPGLYTNVGEYVQWITDTM 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30414NP_611789.2 Tryp_SPc 41..290 CDD:238113 80/269 (30%)
grassNP_651543.1 CLIP 32..90 CDD:197829
Tryp_SPc 121..371 CDD:238113 82/270 (30%)
Blue background indicates that the domain is not in the aligned region.

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