DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30414 and Gzma

DIOPT Version :10

Sequence 1:NP_611789.2 Gene:CG30414 / 37705 FlyBaseID:FBgn0050414 Length:305 Species:Drosophila melanogaster
Sequence 2:NP_703198.2 Gene:Gzma / 266708 RGDID:628640 Length:261 Species:Rattus norvegicus


Alignment Length:266 Identity:69/266 - (25%)
Similarity:107/266 - (40%) Gaps:57/266 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 ITGGADAGLFSNPWMV--KVLGEKLCGGSLITSRFVLTAAHCIVSTHMRVRLGEYKTRFPGKDCS 103
            |.||......|.|:||  |:..:.:|.|:||...:||||||||......|.||.:..:...:...
  Rat    29 IIGGDTVVPHSRPYMVLLKLKPDSVCAGALIAKNWVLTAAHCIPGKKSEVILGAHSIKKEPEQQI 93

  Fly   104 RCVPKSYKLRRIRLGEYDTRFPGKDCCVPKSYELAVDRKILHADYNLNLDNDIGLLRMKSFVQYS 168
            ..|.|:|.            :|   |....::|  .|.::|.......|:.::.:|.:.   :..
  Rat    94 LSVKKAYP------------YP---CFDKHTHE--GDLQLLRLKKKATLNKNVAILHLP---KKG 138

  Fly   169 DYVRP--ICLLVEGHMAESPIFNITGWG-VTNDGTPSRRLQRATVYNTDLHFCRSK----FTKQV 226
            |.|:|  .|             ::.||| ..|...||..|:...:...|...|..:    |...:
  Rat   139 DDVKPGTRC-------------HVAGWGRFHNKSPPSDTLREVNITVIDRKICNDEKHYNFNPVI 190

  Fly   227 DESQICAAGT--NSDACHGDSGGPLSAQVPFAGSWLTFQYGLVSYG-SAAC---HSFSVYTNVT- 284
            ..:.|||...  ..|:|:|||||||..:..|.        |:.::| ...|   ....:||.:: 
  Rat   191 GLNMICAGNLRGGKDSCYGDSGGPLLCEGIFR--------GITAFGLEGTCGDPKGPGIYTLLSD 247

  Fly   285 HHRDWI 290
            .|.|||
  Rat   248 KHLDWI 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30414NP_611789.2 Tryp_SPc 41..290 CDD:238113 67/264 (25%)
GzmaNP_703198.2 Tryp_SPc 29..256 CDD:238113 69/266 (26%)

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