DRSC/TRiP Functional Genomics Resources

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Protein Alignment yellow-d2 and RGN

DIOPT Version :9

Sequence 1:NP_611788.1 Gene:yellow-d2 / 37704 FlyBaseID:FBgn0034856 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_004674.1 Gene:RGN / 9104 HGNCID:9989 Length:299 Species:Homo sapiens


Alignment Length:273 Identity:55/273 - (20%)
Similarity:93/273 - (34%) Gaps:94/273 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 PHNCDVGFVYMADSIGDGIVVYDVAAQQSWRIEN------KFTYPHPDFGTFTIAGESFQLWDGT 248
            |.||..|...:.:.:.:.::..|:.|::..|.::      :.|...|      ::..:.:...|.
Human    11 PENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAP------VSSVALRQSGGY 69

  Fly   249 VSTTLTPHGLGGRRMMYFHSLSSEWQMAIPLDVVNNG-SNWRLND--VSAALDQFQLLGKRGSQC 310
            |:|..|.          |.:|:.:.|.|:.|..|:|. .|.|.||  |..|...|  .|....:.
Human    70 VATIGTK----------FCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYF--AGTMAEET 122

  Fly   311 VAAAMS------------------------ESG----------FLICGLVQPASLLAWNIRTG-Y 340
            ..|.:.                        .:|          :.|..|........::::|| .
Human   123 APAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQI 187

  Fly   341 SHQNLVMLVEDEQRLQFASGLKIVRNHEGKEELW--------------VLSNRLQK--------- 382
            |::..|..:|.|:  |...|:.|  :.|||  ||              |...|||.         
Human   188 SNRRSVYKLEKEE--QIPDGMCI--DAEGK--LWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTT 246

  Fly   383 --AFGAGLDYKEI 393
              .|| |.:|.|:
Human   247 SCCFG-GKNYSEM 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yellow-d2NP_611788.1 MRJP 122..411 CDD:281074 55/273 (20%)
RGNNP_004674.1 SGL 16..264 CDD:400653 52/268 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3386
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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