DRSC/TRiP Functional Genomics Resources

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Protein Alignment yellow-d2 and yellow-h

DIOPT Version :9

Sequence 1:NP_611788.1 Gene:yellow-d2 / 37704 FlyBaseID:FBgn0034856 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_651912.3 Gene:yellow-h / 43779 FlyBaseID:FBgn0039896 Length:463 Species:Drosophila melanogaster


Alignment Length:406 Identity:118/406 - (29%)
Similarity:207/406 - (50%) Gaps:24/406 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SAQALESVFGAYNLELEFPSPQERQRALRDGLYDPGSVIPIDVDVYYKHGDATPSIFVTIPRFAK 82
            |...||.|:....|:..:.:..:||:::.:|.:.|.:.:|:.:||:...      :|||.||:..
  Fly    49 SESQLEIVYEWKYLDFLYSTFVQRQQSILNGDFVPKNNLPLGIDVHNNR------LFVTTPRWKN 107

  Fly    83 GVPYSLAYVTNEMRPNGTLLQAYPSYEWH-KSHGADCNGLTSVYRTQIDECGRMWILDSG----E 142
            |||.||..:....:.:...::.||::|.| ..:..||:.|.|||||.:|.|.|:|::|||    .
  Fly   108 GVPASLGTLPFPPKESSPAIKPYPNWEAHGNPNNPDCSKLMSVYRTAVDRCDRIWLIDSGIVNAT 172

  Fly   143 IDFIQHCPPQLYAIDLESGKVAHQYKMPKRLYKEGV--SRFVTPTVELDPHNCDVGFVYMADSIG 205
            |:..|.|||::...||:|.::..:|.:.....|:..  |..|....|    :||.....::|...
  Fly   173 INLNQICPPKIVVYDLKSDELIVRYNLEASHVKQDSLHSNIVVDIGE----DCDDAHAIVSDVWR 233

  Fly   206 DGIVVYDVAAQQSWRIENKFTYPHPDFGTFTIAGESFQLWDGTVSTTLTPHGLGGRRMMYFHSLS 270
            .|::||.::..:|||:.|...||.|....|.:.|.:||..||....::..:.....|::|||.::
  Fly   234 FGLLVYSLSKNRSWRVTNYNFYPDPFASDFNVYGLNFQWLDGVFGMSIYYNKKIMERVLYFHPMA 298

  Fly   271 SEWQMAIPLDVVNNGSNWRLNDVSAALDQFQLLGKRG--SQCVAAAMSESGFLICGLVQPASLLA 333
            |..:..:|::::.|.|.|:.|....| ..|..:|.||  ||...:.::.:|.:....|....:..
  Fly   299 SFKEFMVPMNILLNESVWQTNTQEYA-KYFIPIGDRGYNSQSSTSGVTRNGIMFFTQVHQDDIGC 362

  Fly   334 WNIRTGYSHQNLVML--VEDEQRLQFASGLKIVRNHEGKEELWVLSNRLQKAFGAGLDYKEINFR 396
            |:....|:..:|...  :|:...:||.:.||:  :.|..:.:|::||||.....:.|||.|:|||
  Fly   363 WDTSKPYTRAHLGKFHNMENSNLIQFPNDLKV--DKEKDQNVWLISNRLPIFLYSNLDYGEVNFR 425

  Fly   397 IQKCGVQELLSGRPCN 412
            |.|..|.:::....||
  Fly   426 ILKANVNKIIRNSVCN 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yellow-d2NP_611788.1 MRJP 122..411 CDD:281074 87/298 (29%)
yellow-hNP_651912.3 MRJP 148..440 CDD:281074 87/298 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449219
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3386
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D202564at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10009
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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