DRSC/TRiP Functional Genomics Resources

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Protein Alignment yellow-d2 and yellow-e3

DIOPT Version :9

Sequence 1:NP_611788.1 Gene:yellow-d2 / 37704 FlyBaseID:FBgn0034856 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_650288.1 Gene:yellow-e3 / 41651 FlyBaseID:FBgn0038150 Length:409 Species:Drosophila melanogaster


Alignment Length:377 Identity:134/377 - (35%)
Similarity:209/377 - (55%) Gaps:20/377 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 ALRDGLYDPGSVIPIDVDVYYKHGD-ATPSIFVTIPRFAKGVPYSLAYVT---NEMRPNGTLLQA 104
            :|.|.|......:|:|||:.|  || .....|:||||.....|::||.|.   ||:..| ..|:.
  Fly    32 SLGDDLSKGNRFLPVDVDIEY--GDEGRHRTFLTIPRLGMATPFTLATVIAEHNELVEN-PRLEP 93

  Fly   105 YPSYEWHKSHGADCNGLTSVYRTQIDECGRMWILDSGEIDFIQHCPPQLYAIDLESGKVAHQYKM 169
            ||:.|||.... :|:|:||..||.||||.|:|::|||:::.:|.||||:...||...::..::.:
  Fly    94 YPNEEWHVPPN-NCSGITSAIRTYIDECWRLWVVDSGQVNSLQLCPPQILTFDLVKDELVQRHAL 157

  Fly   170 PKRLYKEGVSRFVTPTVEL----DPHNCDVGFVYMADSIGDGIVVYDVAAQQSWRIENKFTYPHP 230
            |...|...||.|....|:|    .|:.|..|..|:||:.|.|::|:|....:|||||::...|.|
  Fly   158 PPDSYIPSVSIFTALVVDLAERGTPNRCVGGRAYIADAWGYGLIVFDSLTGRSWRIEHESMKPSP 222

  Fly   231 DFGTFTIAGESFQLWDGTVSTTLTPHGLGGRRMMYFHSLSSEWQMAIPLDVVNNGSNWRLNDVSA 295
                ....|.|.....|..:.:|:|..:.. |.:|||:|:|..:|.:||.::||.:.|:  ..:|
  Fly   223 ----LLRLGRSSNSQAGIFTVSLSPSEVED-RFLYFHTLNSFNEMRVPLSLINNETFWK--SANA 280

  Fly   296 ALDQFQLLGKRGSQCVAAAMSESGFLICGLVQPASLLAWNIR-TGYSHQNLVMLVEDEQRLQFAS 359
            :.|.|..||.||.||.:..|.:||.|.|.|:...:|:.|... :.|:..:|.::..:..:::|.:
  Fly   281 SRDSFHSLGTRGIQCESEVMDQSGNLYCSLISLGALVKWEESVSNYTADDLRVVAYNPHKIKFVT 345

  Fly   360 GLKIVRNHEGKEELWVLSNRLQKAFGAGLDYKEINFRIQKCGVQELLSGRPC 411
            ||||.||.:|:||||.||::.:...|..|...|:.|:|..|...:||:..||
  Fly   346 GLKINRNSKGEEELWALSSQPKLFVGGDLPANEVKFQIIGCRTADLLANTPC 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yellow-d2NP_611788.1 MRJP 122..411 CDD:281074 102/293 (35%)
yellow-e3NP_650288.1 MRJP 110..397 CDD:281074 102/293 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449193
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3386
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D202564at33208
OrthoFinder 1 1.000 - - FOG0012723
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10009
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

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