DRSC/TRiP Functional Genomics Resources

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Protein Alignment yellow-d2 and yellow-g2

DIOPT Version :9

Sequence 1:NP_611788.1 Gene:yellow-d2 / 37704 FlyBaseID:FBgn0034856 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_647710.1 Gene:yellow-g2 / 38295 FlyBaseID:FBgn0035328 Length:382 Species:Drosophila melanogaster


Alignment Length:439 Identity:93/439 - (21%)
Similarity:175/439 - (39%) Gaps:105/439 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IVFGVCCWCWLAASAQALESVFGAYNL---------------ELEFPSPQERQRALRDGLYDPGS 54
            ::.|.|...|    |::..:.:|.:..               :.|||....:......|.:.|.:
  Fly     7 LILGFCLVGW----ARSQGTKYGLWTPDRAHSDSQPIQWTGGQFEFPCASTKSLFKSSGKFIPKN 67

  Fly    55 VIPIDVDVYYKHGDATPSIFVTIPRFAKGVPYSLAYVTNEMRPN--GTLLQAYPSYEWHKSHGAD 117
            ||.....:.   ||   :|::.:||:.||||.:|  |...::|.  .|..:.||.  |......:
  Fly    68 VIATRAQLI---GD---TIYLALPRYRKGVPATL--VKTSIKPGTCSTTFKPYPC--WDLQEEGN 122

  Fly   118 CNGLTSVYRTQIDECGRMWILDSGEIDF----IQHCPPQLYAIDLESGKVAHQYKMPKRLYKEGV 178
            |..|.||....:|:...:|:||:|.::.    ::.|||::.|:.:::|||.      |.:..||:
  Fly   123 CKALQSVVDLVVDQNEVLWVLDTGIVNTLETPVRKCPPKVVAMSVKTGKVL------KTVSLEGL 181

  Fly   179 ----SRFVTPTVELDPHNCDVG-FVYMADSIGDGIVVYDVAAQQSWRIENKFTYPHPDFGTFTIA 238
                ||.....|:..|   |.| |||::|:....|:||::.|.:.:|:    ..|.    ..|..
  Fly   182 TSSNSRLQYLVVDYAP---DGGCFVYVSDAANRAIIVYNLQADRGFRV----VLPK----AVTAG 235

  Fly   239 GESFQLWDGTVSTTLTPHGLGGRRMMYFHSLSSEWQMAIPLDVVNNG-SNWRLNDVSAALDQFQL 302
            ..|..:    :...|.....|... :||..||:....::..:.:.:| ::.|:.|          
  Fly   236 CRSRDV----LYIALIRRDCGSTE-LYFTYLSTNKLFSLKSEYLRSGVADGRILD---------- 285

  Fly   303 LGKRGSQCVAAAMSESGFLICGLVQPASLLAW---------NIRTGYSHQNLVML---VEDEQRL 355
            |||:.|:.|.........:.......|.:..|         |.:..|..|...::   |.|.:| 
  Fly   286 LGKKPSRMVIIGTDNGSAIFFRNEGDAEVYRWDTNSTFVEANFKPVYRSQTCQLVTHAVPDYKR- 349

  Fly   356 QFASGLKIVRNHEGKEELWVLSNRLQKAFGAGLDYKEINFRIQKCGVQE 404
               :.:::::::        ..:.:|...|.|        .||:.|:.:
  Fly   350 ---NTMRVLQSN--------FPDYMQNRVGCG--------AIQQLGLMQ 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yellow-d2NP_611788.1 MRJP 122..411 CDD:281074 63/305 (21%)
yellow-g2NP_647710.1 MRJP 127..381 CDD:281074 63/305 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449259
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3386
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10009
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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