DRSC/TRiP Functional Genomics Resources

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Protein Alignment yellow-d and yellow-f2

DIOPT Version :9

Sequence 1:NP_523820.2 Gene:yellow-d / 37703 FlyBaseID:FBgn0041712 Length:432 Species:Drosophila melanogaster
Sequence 2:NP_650247.1 Gene:yellow-f2 / 41596 FlyBaseID:FBgn0038105 Length:452 Species:Drosophila melanogaster


Alignment Length:384 Identity:106/384 - (27%)
Similarity:176/384 - (45%) Gaps:58/384 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 DRENAQAAGNLVPENGTPIDVQPQYMANGQIRLFTTIPRFVTGIPYTLATVS-ATQGRN-GPLLQ 114
            |..||    :.:|.|..|:..     .:.:.|||.|:||...|||.||..:. |..|.| .|.|:
  Fly    90 DDPNA----SYIPYNNVPMGA-----THFRGRLFVTMPRRRVGIPSTLNYIDLAEDGSNRSPKLR 145

  Fly   115 PYPNYSWHNANGEDCDRITSAFRVAITECNQMWVIDSGVI----GTTQLCPPQLLQFALATDRLL 175
            .|||::.:..|. ..:.:.|.:|.::..|.::|.||:|::    ...|:..|.:....||||::|
  Fly   146 AYPNFALNQFNA-SAENLVSVYRTSVDACQRLWFIDTGMLEYPNNRQQIRRPSIWVVDLATDQVL 209

  Fly   176 HRFRFPND-TYIPSGSLFITPNVLVQDPPPRGTCSRTMIYVADVSYHGLVVYDHQAQTSWRAENR 239
            .||..|.. .....|...||.:|      ..|.|.....|:.|:.|..|.||..:....|..|:.
  Fly   210 KRFDVPESIAETGRGLASITVDV------KAGQCGDAYAYIPDLVYRRLYVYHLRNDRIWSFEHN 268

  Fly   240 FMYPDPDYGKHTIAGESFYLMDGMFALN------NDKRNLYFHPLASASEYSVPLSALNRQQNWA 298
            :...||..|..:|.|::|...||:|::.      :..|:.||||:||.:|:.|....|.::.|.|
  Fly   269 YFNFDPLSGDLSIGGQTFRWDDGIFSITLGAQKLDGSRDAYFHPMASTNEFVVSNRVLQQESNAA 333

  Fly   299 NGPEALPEEFRLLGRR--RSECAASAID-----------GRNNVYCVTFNPVKLFVWNVNSPYNS 350
            .....  .:||:||.|  .::....|.|           .||.|.|          |..:.|.::
  Fly   334 RSDHG--NDFRVLGSRGPSTQSTMHAYDPGTGVIFFDEIQRNGVGC----------WKTSKPISA 386

  Fly   351 RNFGNLPAKSDDLQFVSGMKVLRNREGQEELWMLSNRYQKIAAGTLNSKEVNFRILRRK 409
            .|:|::.:.::|:.:.|.:.:  :.:|  .:|::||........||::...||||.::|
  Fly   387 ENYGSVDSNAEDMIYPSDLSI--DEDG--TIWVMSNSMPIFIYSTLDTSIYNFRIWKQK 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yellow-dNP_523820.2 MRJP 133..413 CDD:281074 80/301 (27%)
yellow-f2NP_650247.1 MRJP 163..451 CDD:281074 80/301 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449230
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3386
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D940689at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10009
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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