DRSC/TRiP Functional Genomics Resources

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Protein Alignment yellow-d and y

DIOPT Version :9

Sequence 1:NP_523820.2 Gene:yellow-d / 37703 FlyBaseID:FBgn0041712 Length:432 Species:Drosophila melanogaster
Sequence 2:NP_476792.1 Gene:y / 30980 FlyBaseID:FBgn0004034 Length:541 Species:Drosophila melanogaster


Alignment Length:397 Identity:114/397 - (28%)
Similarity:187/397 - (47%) Gaps:67/397 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 WGQLEFGFPTAQDRENAQAAGNLVPENGTPIDVQPQYMANGQIRLFTTIPRFVTGIPYTLATVSA 104
            |.||:|.||..:.::.|.|:|:.:|:|..|:.|  ::..|   |||.|:||:..|||.||..::.
  Fly    31 WSQLDFAFPNTRLKDQALASGDYIPQNALPVGV--EHFGN---RLFVTVPRWRDGIPATLTYINM 90

  Fly   105 TQGRNG-PLLQPYPNYSWHNANGEDC-DRITSAFRVAITECNQMWVIDSGVIG----TTQLCPPQ 163
            .:...| |.|.|||:  |.:....|| :.||:|:|:.:.||.::||:|:|.:|    ||..||..
  Fly    91 DRSLTGSPELIPYPD--WRSNTAGDCANSITTAYRIKVDECGRLWVLDTGTVGIGNTTTNPCPYA 153

  Fly   164 LLQFALATDRLLHRFRFPN-----DTYIPSGSLFITPNVLVQDPPPRGTCSRTMIYVADVSYHGL 223
            :..|.|.||..:.|:..|.     :|:|.:.::.|..|           |.....|.||...:||
  Fly   154 VNVFDLTTDTRIRRYELPGVDTNPNTFIANIAVDIGKN-----------CDDAYAYFADELGYGL 207

  Fly   224 VVYDHQAQTSWR-AENRFMYPDPDYGKHTIAGESF-YLMDGMFAL------NNDKRNLYFHPLAS 280
            :.|..:...||| :.:.:.:|||..|...:||.:| :..:|:|.:      ::..|.|||.||||
  Fly   208 IAYSWELNKSWRFSAHSYFFPDPLRGDFNVAGINFQWGEEGIFGMSLSPIRSDGYRTLYFSPLAS 272

  Fly   281 ASEYSVPLSALNRQQNWANGPEALPEEFRLLGRR----RSECAASAIDG--------RNNVYCVT 333
            ..:::|....|..:..    .|....:|..|..|    .:.....:.||        :|.|.|  
  Fly   273 HRQFAVSTRILRDETR----TEDSYHDFVALDERGPNSHTTSRVMSDDGIELFNLIDQNAVGC-- 331

  Fly   334 FNPVKLFVWNVNSPYNSRNFGNLPAKSDDLQFVSGMKVLRNREGQEELWMLSNRYQKIAAGTLNS 398
                    |:.:.||:.:..|.:......|.|.:.:|:..|:    .:|:||:|........|:.
  Fly   332 --------WHSSMPYSPQFHGIVDRDDVGLVFPADVKIDENK----NVWVLSDRMPVFLLSDLDY 384

  Fly   399 KEVNFRI 405
            .:.||||
  Fly   385 SDTNFRI 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yellow-dNP_523820.2 MRJP 133..413 CDD:281074 79/302 (26%)
yNP_476792.1 MRJP 119..405 CDD:308585 79/302 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449214
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3386
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D202564at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10009
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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