Sequence 1: | NP_611787.2 | Gene: | Golgin245 / 37702 | FlyBaseID: | FBgn0034854 | Length: | 1489 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001178009.1 | Gene: | Golga4 / 501069 | RGDID: | 1591925 | Length: | 2213 | Species: | Rattus norvegicus |
Alignment Length: | 2270 | Identity: | 488/2270 - (21%) |
---|---|---|---|
Similarity: | 835/2270 - (36%) | Gaps: | 857/2270 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MFANLKNKLIEEVKASPSKFQQFANAAQAAVSSSSSTTPNSETNT-SNNENFFSITEEDTP---- 60
Fly 61 ---QNSPYRIQKLPATSASALRGRSTQSL--NGATSRTRKLSNSSMAS-DVSFRLPTYEAPAVYH 119
Fly 120 LQSDLDETSSEFDDSASTARLDVITKDQLYDAYKKSLDRYHKYRCRYTDLAKKYKELERDSSKAR 184
Fly 185 SVLVETQDKALRRISELREQCTLEQQAKAHLEEALRVEMDDMSCKMQAYQTKLQLLG-------- 241
Fly 242 ---------------------ENPENITAALERSGQQLES----EQLIDLEESIGKSPLSTNGS- 280
Fly 281 --------SGVSDLQRLLKERDEQLKSVTEKYEA---------------VRKQEEENVLLLAQTK 322
Fly 323 QAIHTELELKDTEVRKLQEKLKQLESQRESHNNEVKEQFKKLQ-ATKQEVDAKLMATEHLLNTLK 386
Fly 387 ESYAIKEQQVVTLEAQLEAI-RVENEQKVK---DLQKQNEDRNTQASDSSEQ---LKKLQAAVQD 444
Fly 445 AESQLLSKDQ-------------------LLESLRSE----QAAKEQQ---------------LK 471
Fly 472 HLKEQLGKLKQENENYLDKLRENKKSSDSQTNEAQDQQKK----LQAAKDEAESKLLA------T 526
Fly 527 E-------------ELLHSLRNDYKA---------QEEKVALLEDK------------LKTLSK- 556
Fly 557 ------------------------------------------ENDVNVEKLHHINEQREAQSTDS 579
Fly 580 QQKI----------------NELRAAKDEAEAKLLSTEHSLNA--------LQAALS-------- 612
Fly 613 ---------AKEEQAASLEQSLNALKTESEHSLQDLRLHNDQLLEI--------VQRHQQNDWEA 660
Fly 661 QLARAREELA-AIQSQRELHALELEKSLEMERESVAALNSEKASQEEQHRLKLEQLQREIQILQD 724
Fly 725 QHANSESETVAALKGQLEALSQDLATSQASLLAKEKELKASGNKL----NKIKKQHE-------- 777
Fly 778 ---QHQAK-----------SSDQSARLEALQSELADRL--SHSRQ-------------------- 806
Fly 807 -----------------------VESEKEELQARVTGILEEI-------GTMQAQMQQ------- 834
Fly 835 VQDSHSELEREKRKLESRIE-------SLQQEQVD-------------------SSAQDERTSAK 873
Fly 874 --------------------LEEIQSENTKLAER-NCLLEEQTNHLESQLQAKQD---------- 907
Fly 908 ---------------EIGKIQAKLQQVLDEHSKLQNA-----QELMDHDHRTLQDKCD------- 945
Fly 946 --------------AYEKDKLLTKHTLDCLQSASEELHRVKANLDRELKEQDQQLSELRERQREQ 996
Fly 997 EQQLK------DQAERCAKLKAQNSESETQLQATISNLREQLDAYKQTEQGIQEKLQATNSSYTT 1055
Fly 1056 QIATLEARWSAANSDVERLHEANDALQLEMEQLKIKHGQEREE----VKESIAQKNR-------- 1108
Fly 1109 -----------------QVVELQEAMATRDRQLQEKIEA---------------SEKLAKFDEIL 1141
Fly 1142 IENEY-----------LNKHTKQLEAEL----AESAELKEKLKSLQCELYVLQEKAEQHA---VQ 1188
Fly 1189 MAEKETQSATA---------TAEVSELKKAIEEQAVELT-----RQKE---------------H- 1223
Fly 1224 -------------ASFVTEQSDA--------------VQKDLLQAQ---QQLHDKQIELAMSRDE 1258
Fly 1259 -------QALLQAEADGLRQEVI--CLKEHLS-----PSTDSDSL-------------------- 1289
Fly 1290 --------RSLN----ERLQRELE----------------------------------------- 1301
Fly 1302 --------------------------DLKHKSAG------------------------------- 1309
Fly 1310 ---------AESNMQQEIEELQAN------------NQQMAERINELE-TLRAGI---------- 1342
Fly 1343 ------QAQQLLASMAPK--NVQEAAAAGEKAELESKLKEIMNEVQDVTNRNLFLEQKCENFLIL 1399
Fly 1400 EQSNER----LKLQ-----------NAKLSRQ--------LDETLVSMQHSEAVPA--------- 1432
Fly 1433 -----------NTEFEYLRNIMFQYLTGNTNNETLVKVISAVLKFSPQQAQVALEKEHQR 1481 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Golgin245 | NP_611787.2 | Smc | 286..1089 | CDD:224117 | 253/1189 (21%) |
Phage_GPO | <306..421 | CDD:301727 | 27/134 (20%) | ||
Smc | 737..1442 | CDD:224117 | 238/1242 (19%) | ||
MIT_CorA-like | <1244..>1333 | CDD:294313 | 38/253 (15%) | ||
Grip | 1433..1477 | CDD:197860 | 21/43 (49%) | ||
Golga4 | NP_001178009.1 | PHA03252 | 177..>279 | CDD:223024 | 28/101 (28%) |
DUF3584 | <281..>980 | CDD:288943 | 164/730 (22%) | ||
Myosin_tail_1 | 649..1645 | CDD:279860 | 211/1023 (21%) | ||
DUF342 | <847..934 | CDD:302792 | 26/91 (29%) | ||
COG2604 | <911..998 | CDD:225324 | 23/90 (26%) | ||
Smc | 1353..2128 | CDD:224117 | 149/783 (19%) | ||
Grip | 2155..2198 | CDD:197860 | 21/43 (49%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166341442 | |
Domainoid | 1 | 1.000 | 275 | 1.000 | Domainoid score | I1697 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 276 | 1.000 | Inparanoid score | I2880 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0007308 | |
OrthoInspector | 1 | 1.000 | - | - | oto98354 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR19327 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 8.080 |