Sequence 1: | NP_611787.2 | Gene: | Golgin245 / 37702 | FlyBaseID: | FBgn0034854 | Length: | 1489 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006248441.1 | Gene: | Golgb1 / 192243 | RGDID: | 708429 | Length: | 3228 | Species: | Rattus norvegicus |
Alignment Length: | 1785 | Identity: | 387/1785 - (21%) |
---|---|---|---|
Similarity: | 731/1785 - (40%) | Gaps: | 447/1785 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 35 SSTTPNSETNTSNNENFFSITEEDTPQNSPYRIQKLPATSASALRGRSTQSLNGATSRTRKLSNS 99
Fly 100 SMASDVSFRLPTYEAPAVYHLQSDLDETS------SEFDDSASTARLDVITKDQLYDAYKKSLD- 157
Fly 158 --RYHKYRCRYT-----DLAKKYKELERDSS-------KARSVLVETQDKALRRISELREQCTLE 208
Fly 209 QQAKAHLEEALRVEMDDMSCKMQ---AYQTKLQLLGENPENITAALERSGQQLESEQLIDLEESI 270
Fly 271 GKSPLSTNGSSGVSDLQRLLKERD--------------EQLKSVTEKYEAVRKQEEENVL----- 316
Fly 317 ------LLAQTKQAIHTELELKDTEVRKLQEKLKQLESQRESHNNEVKEQFKKLQATKQEVDAKL 375
Fly 376 M---------------ATEHLLNTLKESYAIKEQ------QVVTLEAQLEAIRVENE-------- 411
Fly 412 -------QKVKDLQKQNEDRNTQASDSSEQLKKL-------------QAAVQDAESQLL---SKD 453
Fly 454 QLLESLRSEQAAKE--QQLKHLKEQLGKLKQE--NENYLDKLRENKKSSDSQTNEAQDQQKKL-- 512
Fly 513 ---------------------------QAAKDEAESKLL-ATEELLHSLRNDYKAQEE---KVAL 546
Fly 547 LEDKLKTLSK-ENDVNVEKLHHINEQREAQSTDSQQKINELRAAKDEAEAKLLSTEHSLNALQAA 610
Fly 611 LSAKEEQA--------------ASLEQSLNALKTESEHSLQDLRLHNDQLLEIVQRHQQNDWEAQ 661
Fly 662 LARAREELAAIQSQ--REL-HALELEKSLEMERESVAALNSEK--------ASQEEQHRLKLEQL 715
Fly 716 QREIQILQDQHANSESETVAALKGQLEALSQDLATSQASLLAKEKELKASGNKLNKIK------- 773
Fly 774 ---KQHEQH---QAKSSDQSARLE-----ALQSEL-------------ADRLSHSRQV-----ES 809
Fly 810 EKEELQARVTGILEEIGTMQAQMQQVQDSHSELEREKRKLESRIESL------------------ 856
Fly 857 --------QQE-------------QVDSSAQDERT------------------SAKLEEIQ---- 878
Fly 879 ---------------------SENTKLAERNCLLEEQTNHLESQLQAKQDEIGKIQAKLQQVLDE 922
Fly 923 HSKLQNAQELMDHDHRTLQDK--CDAYEKDKLL---------TKHTLDCLQSASEELHRVKANLD 976
Fly 977 RELKE-----------QDQQLSELRERQREQEQQLKDQAERCAKLKAQNSESETQLQATISNLRE 1030
Fly 1031 QLDAYKQTEQGIQEKLQATNSSYTTQIATLEARWSAANSDVERLHEANDALQLEMEQLKIKHGQE 1095
Fly 1096 REEVKESIAQKNRQVVELQEAMATRDRQLQEKI-EASEKLAKFDEILIENE-YLNKHTKQLEAEL 1158
Fly 1159 AESA----ELKEKLKSLQCELYVLQEKAEQHAVQMAEKETQSATATAEVSELKKAIEEQAVELTR 1219
Fly 1220 QKEHASFVTEQSDAVQKDLLQAQQQLHDKQIELAMSRDEQALLQAEADGLRQEVICLKEHLSPST 1284
Fly 1285 DSDSLRSLNERLQREL----EDLKHKSAGAES--NMQQEIEELQANNQQMAERI-NELETLRAGI 1342
Fly 1343 QAQQLLASMAPKNVQEAAAAGEKAELESKLKEIMNEVQDVTNRNL-FLEQKCENFLILEQSNERL 1406
Fly 1407 KLQNAKLSRQLDETL-------------VSMQ---HSEAVPANTEFEYLRNIMFQYLTGNTNNET 1455
Fly 1456 LVKVISAVLK--FSPQQAQVALEKEHQRRS 1483 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Golgin245 | NP_611787.2 | Smc | 286..1089 | CDD:224117 | 222/1082 (21%) |
Phage_GPO | <306..421 | CDD:301727 | 32/161 (20%) | ||
Smc | 737..1442 | CDD:224117 | 188/874 (22%) | ||
MIT_CorA-like | <1244..>1333 | CDD:294313 | 21/95 (22%) | ||
Grip | 1433..1477 | CDD:197860 | 10/45 (22%) | ||
Golgb1 | XP_006248441.1 | alaS | <45..114 | CDD:234701 | |
PRK12704 | 63..>181 | CDD:237177 | |||
SMC_prok_B | 189..>947 | CDD:274008 | |||
SMC_prok_B | 720..1623 | CDD:274008 | 80/337 (24%) | ||
Smc | 1339..2169 | CDD:224117 | 181/855 (21%) | ||
SMC_prok_B | 1876..2632 | CDD:274008 | 163/790 (21%) | ||
Smc | 2258..3046 | CDD:224117 | 178/800 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |