DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3500 and Tex261

DIOPT Version :10

Sequence 1:NP_611783.1 Gene:CG3500 / 37697 FlyBaseID:FBgn0034849 Length:198 Species:Drosophila melanogaster
Sequence 2:XP_008761281.1 Gene:Tex261 / 297392 RGDID:1305851 Length:204 Species:Rattus norvegicus


Alignment Length:202 Identity:99/202 - (49%)
Similarity:136/202 - (67%) Gaps:7/202 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAVLYLLGWVSLAIQIVFLTLSIVAGLYYLAELAEEYTTAARKCILFLISFTIFVYILLLLFEDL 65
            |..:|:|.|:||.||:.|:||::.|||||||||.||||.|..:.|.::|.|:..|.|.|.:||..
  Rat     1 MWFMYVLSWLSLFIQVAFITLAVAAGLYYLAELIEEYTVATSRIIKYMIWFSTAVLIGLYVFERF 65

  Fly    66 PWSLIICGLVAQGFHLGIMSGFPFVRLLSLPLLGSLAMLVVNHFLAFQHFVTVYVPFTQVLAYFT 130
            |.|:|..||.....:.|::..|||:.|.|...:.|..::||||:||||.|...|.||::||||||
  Rat    66 PTSMIGVGLFTNLVYFGLLQTFPFIMLTSPNFILSCGLVVVNHYLAFQFFAEEYYPFSEVLAYFT 130

  Fly   131 ICMWIVPFALFVSLSANDSVLPTTVSDQSR----RSPDVVSNYFS---RNKKQGLLSLFQYLKEA 188
            .|:||:|||.||||||.::|||:|:.....    :|.|||||||:   |.|:.|:|.:|.::|||
  Rat   131 FCLWIIPFAFFVSLSAGENVLPSTMQPGGEEGLLKSDDVVSNYFTKGKRGKRLGILVVFSFIKEA 195

  Fly   189 LLPGRTK 195
            :||.|.|
  Rat   196 ILPSRQK 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3500NP_611783.1 Erv26 1..187 CDD:461197 92/192 (48%)
Tex261XP_008761281.1 Erv26 1..194 CDD:461197 92/192 (48%)

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