DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5R1 and Psmb7

DIOPT Version :10

Sequence 1:NP_611776.1 Gene:Prosbeta5R1 / 37690 FlyBaseID:FBgn0034842 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_445984.1 Gene:Psmb7 / 85492 RGDID:621093 Length:277 Species:Rattus norvegicus


Alignment Length:228 Identity:64/228 - (28%)
Similarity:97/228 - (42%) Gaps:25/228 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 ATSNFENPY-----------ELMAPPFERPAENLPKILSHCGIRMDFDHGTTTLGFKYRGGVILC 86
            |.|.|:.|.           .::...|.:....|||...         .|||..|..|:.|::|.
  Rat     3 AVSVFQAPVGGFSFDNCRRNAVLEADFAKKGFKLPKARK---------TGTTIAGVVYKDGIVLG 58

  Fly    87 ADSRATSGQYIGSQTMRKI--VELNDYMLGTLAGGAADCVYWDRVLAKECRLHQLRYRKRMTVDT 149
            ||:|||.|..:..:...||  :..|.|..|  ||.|||.....::::....||.|...:...|.|
  Rat    59 ADTRATEGMVVADKNCSKIHFISPNIYCCG--AGTAADTDMTTQLISSNLELHSLTTGRLPRVVT 121

  Fly   150 AARIICNISTEYKGMGLVMGMMLAGFDDEGPKLIYVDSEGMRSHGQVFSVGSGSPYALGVLDTGY 214
            |.|::..:...|:|. :...::|.|.|..||.|..:...|........::||||..|:.|.:..:
  Rat   122 ANRMLKQMLFRYQGY-IGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKF 185

  Fly   215 RYDLSDQEAYDLARRAIYHATSKDAYSGGIVRL 247
            |.|:.::||..|...||......|..||..:.|
  Rat   186 RPDMEEEEAKKLVSEAIAAGIFNDLGSGSNIDL 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5R1NP_611776.1 proteasome_beta_type_5 72..259 CDD:239730 55/178 (31%)
Psmb7NP_445984.1 proteasome_beta_type_7 44..232 CDD:239732 55/178 (31%)
Pr_beta_C 235..271 CDD:463597
Blue background indicates that the domain is not in the aligned region.

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