DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5R1 and psmb13a

DIOPT Version :10

Sequence 1:NP_611776.1 Gene:Prosbeta5R1 / 37690 FlyBaseID:FBgn0034842 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_571752.2 Gene:psmb13a / 64280 ZFINID:ZDB-GENE-001208-2 Length:281 Species:Danio rerio


Alignment Length:225 Identity:65/225 - (28%)
Similarity:96/225 - (42%) Gaps:20/225 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 NFENPYELMAPPFERPAE----NLPKILSHCGIRMDFDHGTTTLGFKYRGGVILCADSRATSGQY 96
            ||||....:.  .|..||    ..||.|.         .|||..|..::.||:|.||:||||.:.
Zfish    16 NFENATRNIV--LENGAEEGKIKPPKALK---------TGTTIAGVVFKDGVVLGADTRATSDEV 69

  Fly    97 IGSQTMRKI--VELNDYMLGTLAGGAADCVYWDRVLAKECRLHQLRYRKRMTVDTAARIICNIST 159
            :..:...||  :..|.|..|  ||.|||......:|:....:..:...:...|..|..||.::..
Zfish    70 VADKMCAKIHYIAPNIYCCG--AGTAADTEKTTDMLSSNLTIFSMNSGRNPRVVMAVNIIQDMLF 132

  Fly   160 EYKGMGLVMGMMLAGFDDEGPKLIYVDSEGMRSHGQVFSVGSGSPYALGVLDTGYRYDLSDQEAY 224
            .|.|| :...::|.|.|..|..|..|...|........::|||...|:|:|:..::.::..::|.
Zfish   133 RYHGM-IGANLILGGVDCTGSHLYTVGPYGSMDKVPYLAMGSGDLAAMGILEDRFKVNMDLEQAK 196

  Fly   225 DLARRAIYHATSKDAYSGGIVRLYHIHSEG 254
            .|...||......|..||..:.|..|..||
Zfish   197 ALVSDAIQAGIMCDLGSGNNIDLCVITKEG 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5R1NP_611776.1 proteasome_beta_type_5 72..259 CDD:239730 54/185 (29%)
psmb13aNP_571752.2 proteasome_beta_type_7 45..233 CDD:239732 54/185 (29%)
Pr_beta_C 241..272 CDD:463597
Blue background indicates that the domain is not in the aligned region.

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