DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5R1 and psmb12

DIOPT Version :10

Sequence 1:NP_611776.1 Gene:Prosbeta5R1 / 37690 FlyBaseID:FBgn0034842 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_571751.1 Gene:psmb12 / 64279 ZFINID:ZDB-GENE-001208-1 Length:217 Species:Danio rerio


Alignment Length:221 Identity:70/221 - (31%)
Similarity:111/221 - (50%) Gaps:23/221 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 MDFDH----------GTTTLGFKYRGGVILCADSRATSGQ-YIGSQTMRKIVELNDYMLGTLAGG 119
            ||..|          |||.|..|:.||||:.:||||:.|: |:.|:|:.|:::::|.:...:||.
Zfish     1 MDRHHPYSQVNGVSTGTTILAVKFNGGVIIGSDSRASMGESYVSSKTINKLIQVHDRIFCCIAGS 65

  Fly   120 AADCVYWDRVLAKECRLHQLRYRKRMTVDTAARI---ICNISTEYKGMGLVMGMMLAGFD-DEGP 180
            .||.....::...:...|.::......|..||.|   :|..:.|    .|..|.:.||:| .:||
Zfish    66 LADAQAVTKMAKFQLSFHSIQMESPPLVKAAASIMRELCYSNKE----ELRAGFITAGWDRKKGP 126

  Fly   181 KLIYVDSEGMRSHGQVFSV-GSGSPYALGVLDTGYRYDLSDQEAYDLARRAIYHATSKDAYSGGI 244
            : |||.|.|.....|.|:: ||||.|..|.:|..::.|::.:||...:..|:..|..:|..|||:
Zfish   127 Q-IYVVSLGGMLLSQPFTIGGSGSTYIYGYVDAKFKPDMTLEEATQFSTNALALAMGRDNVSGGV 190

  Fly   245 VRLYHIHSEGWRNIC--NTDCSDLHD 268
            |.|..|...|.::|.  ..:....||
Zfish   191 VHLVVITEAGVKHIVVPGDELPKFHD 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5R1NP_611776.1 proteasome_beta_type_5 72..259 CDD:239730 63/192 (33%)
psmb12NP_571751.1 proteasome_beta_type_6 17..205 CDD:239731 63/192 (33%)

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