DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5R1 and PSMB3

DIOPT Version :10

Sequence 1:NP_611776.1 Gene:Prosbeta5R1 / 37690 FlyBaseID:FBgn0034842 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_002786.2 Gene:PSMB3 / 5691 HGNCID:9540 Length:205 Species:Homo sapiens


Alignment Length:185 Identity:39/185 - (21%)
Similarity:80/185 - (43%) Gaps:6/185 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 HGTTTLGFKYRGGVILCADSRATSGQYIGSQTMRKIVELNDYMLGTLAGGAADCVYWDRVLAKEC 134
            :|...:..|.:..|.:.||.|......:.:...:||..:.|.:...|||.|.|.....:.|....
Human     7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRL 71

  Fly   135 RLHQLRYRKRMTVDTAARIICNISTEYKGMGLVMGMMLAGFDDE--GPKLIYVDSEGMRSHGQVF 197
            .|::|:..:::...|...::.|:..|.:........::||.|.:  .|.:..:|..|.......|
Human    72 NLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDLIGCPMVTDDF 136

  Fly   198 SV-GSGSPYALGVLDTGYRYDLSDQEAYDLARRAIYHATSKDAYSG-GIVRLYHI 250
            .| |:.:....|:.::.:..::.....::...:|:.:|..:||.|| |::  .||
Human   137 VVSGTCAEQMYGMCESLWEPNMDPDHLFETISQAMLNAVDRDAVSGMGVI--VHI 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5R1NP_611776.1 proteasome_beta_type_5 72..259 CDD:239730 38/183 (21%)
PSMB3NP_002786.2 proteasome_beta_type_3 6..201 CDD:239728 39/185 (21%)

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