DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta5R1 and psmb8

DIOPT Version :10

Sequence 1:NP_611776.1 Gene:Prosbeta5R1 / 37690 FlyBaseID:FBgn0034842 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_001103512.2 Gene:psmb8 / 445258 XenbaseID:XB-GENE-479064 Length:281 Species:Xenopus tropicalis


Alignment Length:293 Identity:132/293 - (45%)
Similarity:182/293 - (62%) Gaps:31/293 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALEAICGMNKMPFMRRFDDLQSEWQKEQLREATSNFENPY-----ELMAPPFERPAENLPKILS 60
            |||..|||           ..||:..:..|...|.:...|:     ||..||..:||    |.|.
 Frog     1 MALLTICG-----------PTQSQDWRMPLCGGTISPTVPFQVYNTELAVPPGYQPA----KFLE 50

  Fly    61 HC-----GIRMDFDHGTTTLGFKYRGGVILCADSRATSGQYIGSQTMRKIVELNDYMLGTLAGGA 120
            |.     .::::..||||||.||::.|||:..||||::|.||.:....|::|:|.|:|||::|.|
 Frog    51 HLEEGVDDVKIEPWHGTTTLAFKFQHGVIVAVDSRASAGSYISNVKFNKVIEINPYLLGTMSGSA 115

  Fly   121 ADCVYWDRVLAKECRLHQLRYRKRMTVDTAARIICNISTEYKGMGLVMGMMLAGFDDEGPKLIYV 185
            |||.||:|||||||||:|||...|::|..|::::||:..:|:|.||.:|.|:.|:|.:||.|.||
 Frog   116 ADCQYWERVLAKECRLYQLRNNSRISVSAASKLMCNMMLQYRGTGLSVGSMICGWDKKGPGLYYV 180

  Fly   186 DSEGMRSHGQVFSVGSGSPYALGVLDTGYRYDLSDQEAYDLARRAIYHATSKDAYSGGIVRLYHI 250
            :..|.|..|.:||.|||:.||.||:|:||||||:.:|||||.||||.:||.:||||||.|.|||:
 Frog   181 NDNGTRLCGDIFSTGSGNSYAYGVMDSGYRYDLTPEEAYDLGRRAISYATHRDAYSGGFVNLYHM 245

  Fly   251 HSEGWRNICNTDCSDLHDSYCASGCPGNEKDVG 283
            ..:||..|...|.:||...|.      .||::|
 Frog   246 KEDGWVKIGQFDVNDLLHKYT------EEKNMG 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5R1NP_611776.1 proteasome_beta_type_5 72..259 CDD:239730 102/186 (55%)
psmb8NP_001103512.2 None

Return to query results.
Submit another query.