DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5R1 and psma6b

DIOPT Version :10

Sequence 1:NP_611776.1 Gene:Prosbeta5R1 / 37690 FlyBaseID:FBgn0034842 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_001002589.1 Gene:psma6b / 436862 ZFINID:ZDB-GENE-040718-329 Length:246 Species:Danio rerio


Alignment Length:130 Identity:26/130 - (20%)
Similarity:54/130 - (41%) Gaps:18/130 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 GTTTLGFKYRGGVILCADSRATSGQYIGSQTMRKIVELNDYMLGTLAGGAADCVYWDRVLAKECR 135
            |.|::..:.:...|:....:... :.:.|.|:..:..:.:.:...::|..||    .|...:..|
Zfish    36 GLTSVAVRGKDCAIVVTQKKVPD-KLLDSSTVTHLFRITENIGCVMSGMTAD----SRSQVQRAR 95

  Fly   136 LH----QLRYRKRMTVDTAARIICNIS------TEYKGMGLVMGMMLAGFDDE-GPKLIYVDSEG 189
            ..    :.:|...:.||...:.|.:||      .|.:.:|..  |::.|.|:| ||::...|..|
Zfish    96 YEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCC--MIVIGLDEELGPQVYKCDPAG 158

  Fly   190  189
            Zfish   159  158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5R1NP_611776.1 proteasome_beta_type_5 72..259 CDD:239730 25/129 (19%)
psma6bNP_001002589.1 proteasome_alpha_type_6 8..220 CDD:239723 26/130 (20%)

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