DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5R1 and psma8

DIOPT Version :10

Sequence 1:NP_611776.1 Gene:Prosbeta5R1 / 37690 FlyBaseID:FBgn0034842 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_998331.1 Gene:psma8 / 406445 ZFINID:ZDB-GENE-040426-2194 Length:251 Species:Danio rerio


Alignment Length:186 Identity:45/186 - (24%)
Similarity:83/186 - (44%) Gaps:24/186 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 GTTTLGFKYRGGVILCADSRATSGQYIGSQTMRKIVELNDYMLGTLAGGAADCVYWDRVLAK--- 132
            |:|.:|.:.:..|:|..:.::.: :....:|:|||..|::::....||..||.    |::..   
Zfish    31 GSTAVGIRGKDIVVLGVEKKSVA-KLQEERTVRKICALDEHVCMAFAGLTADA----RIVINRAR 90

  Fly   133 -ECRLHQLRYRKRMTVDTAARIICNISTEY------KGMGLVMGMMLAGFDDEG-PKLIYVDSEG 189
             ||:.|:|.....:||:...|.|..:...|      :..|:  ..::.|||.:| |:|...|..|
Zfish    91 VECQSHRLTVEDPVTVEYITRYIATLKQRYTQSNGRRPFGI--SALIVGFDYDGTPRLYQTDPSG 153

  Fly   190 MRSHGQVFSVGSGSPYALGVLDTGYRYD--LSDQEAYDLARRAIYHATSKDAYSGG 243
            .....:..::|..:......|:..|..:  .||.:|..||.:|:.....    |||
Zfish   154 TYHAWKANAIGRSAKTVREFLEKNYTDEAIASDNDAIKLAIKALLEVVQ----SGG 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5R1NP_611776.1 proteasome_beta_type_5 72..259 CDD:239730 44/185 (24%)
psma8NP_998331.1 proteasome_alpha_type_7 5..213 CDD:239724 45/186 (24%)

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