DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5R1 and Psmb10

DIOPT Version :10

Sequence 1:NP_611776.1 Gene:Prosbeta5R1 / 37690 FlyBaseID:FBgn0034842 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_001020808.1 Gene:Psmb10 / 291983 RGDID:1307428 Length:273 Species:Rattus norvegicus


Alignment Length:207 Identity:65/207 - (31%)
Similarity:94/207 - (45%) Gaps:17/207 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 FERPAENLPKILSHC--GIRMDFDH--GTTTLGFKYRGGVILCADSRATSGQYIGSQTMRKI--V 106
            ||....|..  |.|.  |:|:....  |||..|..:|.||||.||:|||:...:..::..||  :
  Rat    14 FENCQRNAS--LEHVLPGLRVPLARKTGTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFI 76

  Fly   107 ELNDYMLGTLAGGAADCVYWDRVLAKECRLHQLRYRKRMTVDTAARIICNISTEYK---GMGLVM 168
            ....|..|  ||.|||.....|:.|.:..||.|...:...|.|..||:......|:   |..|::
  Rat    77 APKIYCCG--AGVAADTEMTTRMAASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASLIV 139

  Fly   169 GMMLAGFDDEGPKLIYVDSEGMRSHGQVFSVGSGSPYALGVLDTGYRYDLSDQEAYDLARRAIYH 233
            |    |.|..||:|..|...|..|.....::|||...|:.:|:..::.:::.:.|.:|...||..
  Rat   140 G----GVDLNGPQLYSVHPHGSYSRLPFTALGSGQDAAVALLEDRFQPNMTLEAAQELLVEAITA 200

  Fly   234 ATSKDAYSGGIV 245
            ....|..|||.|
  Rat   201 GILGDLGSGGSV 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5R1NP_611776.1 proteasome_beta_type_5 72..259 CDD:239730 57/179 (32%)
Psmb10NP_001020808.1 proteasome_beta_type_7 40..226 CDD:239732 57/179 (32%)
Pr_beta_C 231..267 CDD:463597
Blue background indicates that the domain is not in the aligned region.

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