DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta5R1 and Psmb2

DIOPT Version :10

Sequence 1:NP_611776.1 Gene:Prosbeta5R1 / 37690 FlyBaseID:FBgn0034842 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_036100.3 Gene:Psmb2 / 26445 MGIID:1347045 Length:201 Species:Mus musculus


Alignment Length:157 Identity:39/157 - (24%)
Similarity:71/157 - (45%) Gaps:13/157 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 VILCADSRATSGQYIGSQTMRKIVELNDYMLGTLAGGAADCVYWDRVLAKECRLHQLRYRKRMTV 147
            |::.:|..|.|..........|:.::::.:|....|.|.|.|.:...:.|..:|:::|....::.
Mouse    13 VLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSP 77

  Fly   148 DTAARII------CNIS-TEYKGMGLVMGMMLAGFDD-EGPKLIYVDSEGMRSHGQVFSVGSGSP 204
            ..||...      |..| |.|.     :.::|||:|: |||.|.|:|.....:.....:.|.|:.
Mouse    78 TAAANFTRRNLADCLRSRTPYH-----VNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAF 137

  Fly   205 YALGVLDTGYRYDLSDQEAYDLARRAI 231
            ..|.:||..|...:|.:.|.:|.|:.:
Mouse   138 LTLSILDRYYTPTISRERAVELLRKCL 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5R1NP_611776.1 proteasome_beta_type_5 72..259 CDD:239730 39/157 (25%)
Psmb2NP_036100.3 proteasome_beta_type_2 1..192 CDD:239727 39/157 (25%)

Return to query results.
Submit another query.