DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5R1 and Psma5

DIOPT Version :10

Sequence 1:NP_611776.1 Gene:Prosbeta5R1 / 37690 FlyBaseID:FBgn0034842 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_036097.1 Gene:Psma5 / 26442 MGIID:1347009 Length:241 Species:Mus musculus


Alignment Length:202 Identity:48/202 - (23%)
Similarity:87/202 - (43%) Gaps:46/202 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 GTTTLGFKYRGGVILCADSRATSGQYIGSQTMRKIVELNDYMLGTLAGGAADCVYWDRVLAKECR 135
            |:|.:|.:...||.|..:.|.|| ..:...::.||||::.::...::|..||.    :.|..:.|
Mouse    34 GSTAIGIQTSEGVCLAVEKRITS-PLMEPSSIEKIVEIDAHIGCAMSGLIADA----KTLIDKAR 93

  Fly   136 L----HQLRYRKRMTVDTAARIICNISTEYK-------------GMGLVMGMMLAGFDDEGPKLI 183
            :    |...|.:.|||::..:.:.|::.::.             |:.|:.|    |.|::||:|.
Mouse    94 VETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFG----GVDEKGPQLF 154

  Fly   184 YVDSEGMRSHGQVFSVGSGSPYALGVLDTGYRYDLSDQEAYDLARRAIYH--ATSKDAYSGGIVR 246
            ::|..|........::||.|..|...|          ||        :||  .|.|:|....::.
Mouse   155 HMDPSGTFVQCDARAIGSASEGAQSSL----------QE--------VYHKSMTLKEAIKSSLII 201

  Fly   247 LYHIHSE 253
            |..:..|
Mouse   202 LKQVMEE 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5R1NP_611776.1 proteasome_beta_type_5 72..259 CDD:239730 47/201 (23%)
Psma5NP_036097.1 proteasome_alpha_type_5 8..220 CDD:239722 48/202 (24%)

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