DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5R1 and Psmb6

DIOPT Version :10

Sequence 1:NP_611776.1 Gene:Prosbeta5R1 / 37690 FlyBaseID:FBgn0034842 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_032972.3 Gene:Psmb6 / 19175 MGIID:104880 Length:238 Species:Mus musculus


Alignment Length:212 Identity:64/212 - (30%)
Similarity:103/212 - (48%) Gaps:10/212 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 APPFERPAENLPKILSHCGIRMDFDHGTTTLGFKYRGGVILCADSRATSGQYIGSQTMRKIVELN 109
            ||.|.      |:.|:......:...|||.:..::.|||:|.||||.|:|.||.::...|:..::
Mouse    13 APAFG------PEALTPDWENREVSTGTTIMAVQFNGGVVLGADSRTTTGSYIANRVTDKLTPIH 71

  Fly   110 DYMLGTLAGGAADCVYWDRVLAKECRLHQLRYRKRMTVDTAARIICNISTEYKGMGLVMGMMLAG 174
            |::....:|.|||.......:..:...|.:...:...|.|||.:...:...|: ..|:.|:::||
Mouse    72 DHIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYR-EDLMAGIIIAG 135

  Fly   175 FD-DEGPKLIYVDSEGMRSHGQVFSV-GSGSPYALGVLDTGYRYDLSDQEAYDLARRAIYHATSK 237
            :| .||.::..|...||... |.|:: ||||.|..|.:|..||..::..|.......|:..|..:
Mouse   136 WDPQEGGQVYSVPMGGMMVR-QSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMER 199

  Fly   238 DAYSGGIVRLYHIHSEG 254
            |..|||::||..|...|
Mouse   200 DGSSGGVIRLAAIQESG 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5R1NP_611776.1 proteasome_beta_type_5 72..259 CDD:239730 58/185 (31%)
Psmb6NP_032972.3 proteasome_beta_type_6 34..221 CDD:239731 58/185 (31%)

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