DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5R1 and pbs-5

DIOPT Version :10

Sequence 1:NP_611776.1 Gene:Prosbeta5R1 / 37690 FlyBaseID:FBgn0034842 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_493558.1 Gene:pbs-5 / 173334 WormBaseID:WBGene00003951 Length:284 Species:Caenorhabditis elegans


Alignment Length:255 Identity:103/255 - (40%)
Similarity:147/255 - (57%) Gaps:32/255 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FDDLQSE-----WQKEQL--REATSNFE--------NPYELMAPPFERPAENLPKILSHCGIRMD 67
            |||.:::     ..|:.|  ..|.::|.        .|.:.|...|...|          |..|.
 Worm     6 FDDFENDEGEMAMAKQNLIAEPARADFTFAKLPLGIQPVDFMKTHFAETA----------GKSMQ 60

  Fly    68 FDHGTTTLGFKY-------RGGVILCADSRATSGQYIGSQTMRKIVELNDYMLGTLAGGAADCVY 125
            |..|||||.|.|       :||:|:..||||:||:||.|:::.||:::.|.|:.|:|||||||.:
 Worm    61 FRKGTTTLAFVYEPATPADKGGIIVAVDSRASSGEYISSKSVMKILDIGDRMVATMAGGAADCQF 125

  Fly   126 WDRVLAKECRLHQLRYRKRMTVDTAARIICNISTEYKGMGLVMGMMLAGFDDEGPKLIYVDSEGM 190
            |.|::||.|.|::||.:..:||..|::...|....|:|.||.:|.|:||:|.:||::..|||||.
 Worm   126 WTRIVAKYCTLYELREKTSITVSAASKYFANTLYGYRGQGLSVGSMVAGYDKKGPQIFKVDSEGD 190

  Fly   191 RSHGQVFSVGSGSPYALGVLDTGYRYDLSDQEAYDLARRAIYHATSKDAYSGGIVRLYHI 250
            |...:|.||||||..|.|:||..|:..::|.||..|..|||.|||.:|:.|||:..|.||
 Worm   191 RCQLKVCSVGSGSLNAYGILDNHYKPKMTDDEARKLGLRAIMHATYRDSGSGGVCNLCHI 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5R1NP_611776.1 proteasome_beta_type_5 72..259 CDD:239730 88/186 (47%)
pbs-5NP_493558.1 Ntn_hydrolase 65..252 CDD:469781 88/186 (47%)

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