DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12782 and Rae1

DIOPT Version :10

Sequence 1:NP_611772.2 Gene:CG12782 / 37685 FlyBaseID:FBgn0034838 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_611597.1 Gene:Rae1 / 37467 FlyBaseID:FBgn0034646 Length:346 Species:Drosophila melanogaster


Alignment Length:334 Identity:140/334 - (41%)
Similarity:201/334 - (60%) Gaps:9/334 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FGQPKQT-QQQDYELPNPPNDTISALEFSPRSSSWNAICAGSWDNTVRIWEV-QADRLVPKVMNS 66
            ||..:.| :..|:|:.:||:|::|||||||.:...|.:.|||||:|||.||| |....|||.|.:
  Fly     2 FGATQSTNRMNDFEVASPPDDSVSALEFSPSTVQKNFLVAGSWDSTVRCWEVEQNGATVPKSMKT 66

  Fly    67 LEGTPFDVTWNDSGNKVYLSDSSGQVTEWDLESNQLRKVGLHARAARTCHWV-GP---YLATTSW 127
            :.|...||.|:|.|:||:::....||..|||.|:|:.:|..|....:|||.| ||   .|.|.||
  Fly    67 MGGPVLDVCWSDDGSKVFVASCDKQVKLWDLASDQVMQVAAHDGPVKTCHMVKGPTYTCLMTGSW 131

  Fly   128 DKSIRFWDPRAAIELTRMELPDRSYAADVLNDVAVVACGDRSILAYTLRGGPVEQGRMKSPGESN 192
            ||:::|||.|:...:..:.||:|.|.|||...:|||...:|.::.|:|:..|.|..|.:||.:..
  Fly   132 DKTLKFWDTRSPNPMMTINLPERCYCADVEYPMAVVGTANRGLIIYSLQNSPTEYKRQESPLKYQ 196

  Fly   193 TQVRSVALHQNRDLTSWLIAKTNGMVFDQ--SMAHRTVSFPIRCHRRE-NSGILDVYAVNEVKVN 254
            .:..|:...:.::.|...:....|.|..|  :..:...:|..:|||.. .||..|:||||::..:
  Fly   197 HRAISIFRDKKKEPTGCALGSIEGRVAIQYVNPGNPKDNFTFKCHRTTGTSGYQDIYAVNDIAFH 261

  Fly   255 MVTQHIATVGSDGVFCFWDSQMRSKLLESKVHPQPITKCAISGDGKLFAYALGYDWSKGHEYSDS 319
            .|...:.||||||.|.|||...|:||..|:...|.||||..:.:|::||||:||||||||||.:.
  Fly   262 PVHGTLVTVGSDGTFSFWDKDARTKLKSSETMDQSITKCGFNANGQIFAYAVGYDWSKGHEYFNP 326

  Fly   320 SIKPHIFLR 328
            :.||.||||
  Fly   327 AKKPQIFLR 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12782NP_611772.2 WD40 25..303 CDD:475233 112/285 (39%)
WD40 repeat 26..64 CDD:293791 23/38 (61%)
WD40 repeat 71..101 CDD:293791 13/29 (45%)
WD40 repeat 109..146 CDD:293791 16/40 (40%)
WD40 repeat 195..235 CDD:293791 6/41 (15%)
WD40 repeat 242..272 CDD:293791 13/29 (45%)
Rae1NP_611597.1 WD40 <21..316 CDD:441893 118/294 (40%)
WD40 repeat 25..66 CDD:293791 24/40 (60%)
WD40 repeat 71..105 CDD:293791 14/33 (42%)
WD40 repeat 113..150 CDD:293791 16/36 (44%)
WD40 repeat 157..239 CDD:293791 20/81 (25%)
WD40 repeat 255..293 CDD:293791 17/37 (46%)

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