DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpL22-like and RPL22B

DIOPT Version :10

Sequence 1:NP_611771.1 Gene:RpL22-like / 37684 FlyBaseID:FBgn0034837 Length:312 Species:Drosophila melanogaster
Sequence 2:NP_116619.1 Gene:RPL22B / 850509 SGDID:S000006436 Length:122 Species:Saccharomyces cerevisiae


Alignment Length:116 Identity:39/116 - (33%)
Similarity:71/116 - (61%) Gaps:3/116 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 KKKAWQRFVIDCACVAEDMILDLADFEQYLKTHIKIKNKLNQLKDQVTFERTKNFSLI-IHSGVH 250
            |:|..:...:|.:...|:.:.|.|.:.:||..|||:...:..|.:.:  |.|::.|:: :.|...
Yeast     8 KQKVIKTLTVDVSSPTENGVFDPASYSKYLIDHIKVDGAVGNLGNAI--EVTEDGSIVTVVSSAK 70

  Fly   251 FSKRYFKYLTKRYLKKVSLRDWLRVVSTAKDTFAMTYFKIQDKDFDDDDDD 301
            ||.:|.|||||:||||..||||:|.||..::.:.:.::::..:|.|:::||
Yeast    71 FSGKYLKYLTKKYLKKNQLRDWIRFVSIRQNQYKLVFYQVTPEDADEEEDD 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL22-likeNP_611771.1 LGT <20..189 CDD:469786 1/1 (100%)
Ribosomal_L22e 194..291 CDD:460321 33/97 (34%)
RPL22BNP_116619.1 Ribosomal_L22e 16..110 CDD:460321 33/95 (35%)

Return to query results.
Submit another query.