DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL22-like and AT1G02830

DIOPT Version :10

Sequence 1:NP_611771.1 Gene:RpL22-like / 37684 FlyBaseID:FBgn0034837 Length:312 Species:Drosophila melanogaster
Sequence 2:NP_171782.1 Gene:AT1G02830 / 838098 AraportID:AT1G02830 Length:127 Species:Arabidopsis thaliana


Alignment Length:117 Identity:50/117 - (42%)
Similarity:78/117 - (66%) Gaps:6/117 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 AKKKAWQRFVIDCACVAEDMILDLADFEQYLKTHIKIKNKLNQLKDQVTFERTKNFSLIIHSGVH 250
            ||||. ..|||||:...:|.||::|..|::|:..||::.|...|.:.|:..| .|..:.:::..:
plant    13 AKKKG-VSFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVSITR-YNGKINVNANSN 75

  Fly   251 FSKRYFKYLTKRYLKKVSLRDWLRVVSTAKD--TFAMTYFKIQDK--DFDDD 298
            |||||.|||||:||||.:|||||||:::.||  .:.:.||:|.|:  .:::|
plant    76 FSKRYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRIDDEVASYEED 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL22-likeNP_611771.1 LGT <20..189 CDD:469786 2/2 (100%)
Ribosomal_L22e 194..291 CDD:460321 43/98 (44%)
AT1G02830NP_171782.1 Ribosomal_L22e 20..120 CDD:460321 44/100 (44%)

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