DRSC/TRiP Functional Genomics Resources

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Protein Alignment yip3 and PRE8

DIOPT Version :10

Sequence 1:NP_523819.2 Gene:yip3 / 37683 FlyBaseID:FBgn0040063 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_013618.1 Gene:PRE8 / 854882 SGDID:S000004557 Length:250 Species:Saccharomyces cerevisiae


Alignment Length:168 Identity:45/168 - (26%)
Similarity:75/168 - (44%) Gaps:23/168 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VGLKSTNAVILATDSKE----------YEMYLIDDRIYCCAPRSGIDRNIVLEVSSKVANLVRDR 69
            :|:|:||.|::||:.|.          .::.|:...|.......|.|..::::.|.|||:....|
Yeast    35 LGIKATNGVVIATEKKSSSPLAMSETLSKVSLLTPDIGAVYSGMGPDYRVLVDKSRKVAHTSYKR 99

  Fly    70 --GQ----NVTVSQVRDMFCEKYQTAE----SPNVMIAGQDS-RGLHLFSMECGKSRMVMYG-AK 122
              |:    .:.||:|..:..|..|:..    ..:::|||.|. .|..|:.::...|...... |.
Yeast   100 IYGEYPPTKLLVSEVAKIMQEATQSGGVRPFGVSLLIAGHDEFNGFSLYQVDPSGSYFPWKATAI 164

  Fly   123 GRDKENIVDFLSKDWNDFINLSEAEQLARKALRWEHVE 160
            |:.......||.|.|||.:.|.:|..:|...|: |.||
Yeast   165 GKGSVAAKTFLEKRWNDELELEDAIHIALLTLK-ESVE 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yip3NP_523819.2 Ntn_hydrolase 14..155 CDD:469781 41/161 (25%)
PRE8NP_013618.1 proteasome_alpha_type_2 5..247 CDD:239719 45/168 (27%)

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