Protein Alignment LS2 and AT1G60900

DIOPT Version :10

• Sequence 1: NP_611769.2
• Gene: LS2 / 37681
• FlyBaseID: FBgn0034834
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: NP_176287.3
• Gene: AT1G60900 / 842382
• AraportID: AT1G60900
• Length: 589
• Species: Arabidopsis thaliana
• Alignment Length: 475
• Identity: 168/475 - (35%)
• Similarity: 251/475 - (52%)
• Gaps: 49/475 - (10%)

  Fly     2 RRFRPMNRSWNALRSRSRSRSRSRSPFRSQSITRSRPT-RSDTIYTERTRLQRRFSRPPSSWDIP 65
            ||.|..:|.... |.||||||||||..||:|..|.:.. ||.:....|::.:||     |.:|:.
plant   136 RRSRDRDREVRH-RRRSRSRSRSRSERRSRSEHRHKSEHRSRSRSRSRSKSKRR-----SGFDMA 194

  Fly    66 PEGYNHLTPQQYKAMLASGQIASRILSDGVHGGESAAISMI--------------------TRQA 110
            |......|     |:.|:||:.|...:..:.|..|....|:                    ||.|
plant   195 PPDMLAAT-----AVAAAGQVPSVPTTATIPGMFSNMFPMVPGQQLGALPVLPVQAMTQQATRHA 254

  Fly   111 RRLYVGNIPFGVTDEEMMQFFNHQIMALGFEAKSSHYMDGNAVLTCQTNLEKNFAFLEFRSIDEA 175
            ||:|||.:|....::.:..||:..:.|:|.....    .|:||:....|.||.|||:|.||::||
plant   255 RRVYVGGLPPTANEQSVSTFFSQVMSAIGGNTAG----PGDAVVNVYINHEKKFAFVEMRSVEEA 315

  Fly   176 SQALNFDGMVFRGQTLKIRRPHDYQPVPSISVSAMESYRSFRVPAINVAQQPAVTLPVTTIVPDS 240
            |.|:..||::..|..:|:|||.||.|..:.::...:...:..:.|:.::......|       :.
plant   316 SNAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPNPNLNLGAVGLSSGSTGGL-------EG 373

  Fly   241 PNKIYVGGLPTCLNQDQVKELLQSFGELKGLNLVMDTNTNLNKGFAFFEYCDPSVTDHAIAGLHG 305
            |::|:|||||....:.|::|||:|||.|:|.|||.|..|..:||:||..|.||||||.|.|.|:|
plant   374 PDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSVTDIACAALNG 438

  Fly   306 MLLGDRRLVVQRSIPGGKNAFPGHLPTVL---QVPGISTL--QDPGSPTETLCLLNMVRPEELLD 365
            :.:||:.|.|:|:|.|.....|.....:|   |...:..|  |..|:||:.:||..:|..::|.|
plant   439 IKMGDKTLTVRRAIQGAIQPKPEQEEVLLYAQQQIALQRLMFQPGGTPTKIVCLTQVVTADDLRD 503

  Fly   366 DEEFEDIRTDIKQECAKFGEVRSIKIPRPIGQF-PKRGCGKVFVQFESVEDSQKALKALSGRKFS 429
            |||:.:|..|::||..|||.:.::.||||.... |..|.||||:::..|:.|.||...::||||.
plant   504 DEEYAEIMEDMRQEGGKFGNLVNVVIPRPNPDHDPTPGVGKVFLEYADVDGSSKARSGMNGRKFG 568

  Fly   430 GRIVMTSYYDPEKYLADDLQ 449
            |..|:..||..:||...|.:
plant   569 GNQVVAVYYPEDKYAQGDYE 588

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
LS2	NP_611769.2	U2AF_lg	35..447	CDD:273727	149/438 (34%)
AT1G60900	NP_176287.3	U2AF_lg	<190..587	CDD:273727	142/412 (34%)