Protein Alignment LS2 and u2af2a

DIOPT Version :10

• Sequence 1: NP_611769.2
• Gene: LS2 / 37681
• FlyBaseID: FBgn0034834
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: XP_005157952.1
• Gene: u2af2a / 557103
• ZFINID: ZDB-GENE-050706-131
• Length: 470
• Species: Danio rerio
• Alignment Length: 461
• Identity: 231/461 - (50%)
• Similarity: 296/461 - (64%)
• Gaps: 60/461 - (13%)

  Fly    15 RSRSRSRSRSRSPFRSQSITRSRPTRSDTIYTERTRLQRRFSRPP----------SSWDIPPEGY 69
            |||||.|.|.|   ||:...|.|....|.....:.|..|| ||.|          ..||:||.|:
Zfish    32 RSRSRDRDRKR---RSRDRDRERRGSRDRHGDSKDRRHRR-SRSPHREKKKIKVKKYWDVPPPGF 92

  Fly    70 NHLTPQQYKAMLASGQIASRILSDGVHGGESAAI---------SMITRQARRLYVGNIPFGVTDE 125
            .|:||.|||||.|:|||.:..|...: ..|..|:         |.:|||||||||||||||:|:|
Zfish    93 EHITPMQYKAMQAAGQIPATALLPTM-TPEGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEE 156

  Fly   126 EMMQFFNHQIMALGFEAKSSHYMDGNAVLTCQTNLEKNFAFLEFRSIDEASQALNFDGMVFRGQT 190
            .||.|||.| |.||...::    .||.||..|.|.:||||||||||:||.:||:.|||::|:||:
Zfish   157 SMMDFFNAQ-MRLGGLTQA----PGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQS 216

  Fly   191 LKIRRPHDYQPVPSISVSAMESYRSFRVPAINVAQQPAVTLP-------VTTIVPDSPNKIYVGG 248
            |||||||||||:|.:|                  :.|:|.:|       |:|:||||.:|:::||
Zfish   217 LKIRRPHDYQPLPGMS------------------ENPSVYVPGSLPVGVVSTVVPDSAHKLFIGG 263

  Fly   249 LPTCLNQDQVKELLQSFGELKGLNLVMDTNTNLNKGFAFFEYCDPSVTDHAIAGLHGMLLGDRRL 313
            ||..||.|||||||.|||.||..|||.|:.|.|:||:||.||.|.:::|.|||||:||.|||::|
Zfish   264 LPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNISDQAIAGLNGMQLGDKKL 328

  Fly   314 VVQRSIPGGKN-AFPG--HLPTVLQVPGI---STLQDPGSPTETLCLLNMVRPEELLDDEEFEDI 372
            :|||:..|.|| ...|  ..|..|||||:   |..|..|.|||.|||:|||.|||||||||:|:|
Zfish   329 LVQRASVGSKNTTLTGINQTPVTLQVPGLMNSSVNQMGGIPTEVLCLMNMVAPEELLDDEEYEEI 393

  Fly   373 RTDIKQECAKFGEVRSIKIPRPIGQFPKRGCGKVFVQFESVEDSQKALKALSGRKFSGRIVMTSY 437
            ..|::.||:|:|:|:||:||||:......|.||:||:|.||.|||||::.|:||||:.|:|:|.|
Zfish   394 VEDVRDECSKYGQVKSIEIPRPVDGLDIPGTGKIFVEFMSVFDSQKAMQGLTGRKFANRVVVTKY 458

  Fly   438 YDPEKY 443
            .||:.|
Zfish   459 CDPDAY 464

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
LS2	NP_611769.2	U2AF_lg	35..447	CDD:273727	221/441 (50%)
u2af2a	XP_005157952.1	U2AF_lg	<84..469	CDD:273727	212/405 (52%)