Protein Alignment LS2 and hfp

DIOPT Version :10

• Sequence 1: NP_611769.2
• Gene: LS2 / 37681
• FlyBaseID: FBgn0034834
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: NP_525123.2
• Gene: hfp / 38173
• FlyBaseID: FBgn0028577
• Length: 637
• Species: Drosophila melanogaster
• Alignment Length: 665
• Identity: 121/665 - (18%)
• Similarity: 198/665 - (29%)
• Gaps: 289/665 - (43%)

  Fly    15 RSRSRSRSRSRSPFRSQSITRSRPTRSDTIYTERTR----------LQRRFSRPPSSWDIPPEGY 69
            ||.|...:.|:.|:.||.:...:.| .|..:...||          |.:..|   ...|:..:..
  Fly    29 RSDSGKSTDSKIPYLSQPLYDLKQT-GDVKFGPGTRSALLGLLGGALPKLSS---EQHDLVSKAK 89

  Fly    70 NHLTPQQYKAMLASGQIASRILSDGVHGGESAAI--SMITRQAR-----RLYVGNIPFGVTDEEM 127
            .:...|..|.:|....:|        |..:..|.  :.:.||..     |:|||:|.|.:.::.:
  Fly    90 KYAMEQSIKMVLMKQTLA--------HQQQQLATQRTQVQRQQALALMCRVYVGSISFELKEDTI 146

  Fly   128 MQFFNHQIMALGFEAKSSHYMDGNAVLTCQTNLEKNFAFLEFRSIDEASQAL-NFDGMVFRGQTL 191
            ...|.      .|....|..|..:.:    |...|.|||:|:...:.|..|| ..:|.:..|:.:
  Fly   147 RVAFT------PFGPIKSINMSWDPI----TQKHKGFAFVEYEIPEGAQLALEQMNGALMGGRNI 201

  Fly   192 KIRRPHDYQPVPSISVSAMESYRSFRVPAINVAQQPAVTLPVTTIVPDSPNKIYVGGLPTCLNQD 256
            |:.||.:......:.....|..:||                         |:|||..:...|:::
  Fly   202 KVGRPSNMPQAQQVIDEVQEEAKSF-------------------------NRIYVASIHPDLSEE 241

  Fly   257 QVKELLQSFGELKGLNLVMDTNTNLNKGFAFFEYCDPSVTDHAIAGLHGMLLGDRRLVVQRSI-- 319
            .:|.:.::||.:....|...|:.:.:||:.|.||.:....|.|||.::...||.:.|.|.|||
  Fly   242 DIKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIASMNLFDLGGQLLRVGRSITP 306

  Fly   320 ----------------------------------------------------------------- 319
                                                                             
  Fly   307 PNALACPTTNSTMPTAAAVAAAAATAKIQALDAVASNAVLGLSQNTPVMAAGAVVTKVGAMPVVS 371

  Fly   320 ---------PGGKNAFPGHL------------PTVLQVPG--------ISTLQDP---GSPT--- 349
                     |....|.|..|            |::|.||.        :.||..|   .:||
  Fly   372 AATSAAALHPALAQAAPALLPPGIFQAPTPVAPSLLGVPAGLQPLQAVVPTLPPPALLATPTLPM 436

  Fly   350 ----------------------------------------------------------------- 349
                                                                             
  Fly   437 TVGGVGVGLVPTVATLAGAEASKGAAAAAALSAAANNAAVTAANLSENIKKAHEKQQEELQKKLM 501

  Fly   350 -----------------------------------ETLCLLNMVRPEELLDDEEFEDIRTDIKQE 379
                                               ..:.|.|||.||::  ||..::   :|::|
  Fly   502 DEGDVQTLQQQENMSIKGQSARQLVMQRLMRPVDSRVIILRNMVGPEDV--DETLQE---EIQEE 561

  Fly   380 CAKFGEVRSIKIPRPIGQFPKRGCG-----------KVFVQFESVEDSQKALKALSGRKFSGRIV 433
            |:|||.|..:.|      |.::...           |:||:|.:..::.:..:||.||.|.||.|
  Fly   562 CSKFGTVSRVII------FNEKQTENEDDDEAEIIVKIFVEFSAGAEAMRGKEALDGRFFGGRRV 620

  Fly   434 MTSYYDPEKYLADDL 448
            :...||...:...||
  Fly   621 VAELYDQGIFDQGDL 635

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
LS2	NP_611769.2	U2AF_lg	35..447	CDD:273727	112/642 (17%)
hfp	NP_525123.2	half-pint	10..637	CDD:130706	121/665 (18%)