Protein Alignment LS2 and uaf-1

DIOPT Version :10

• Sequence 1: NP_611769.2
• Gene: LS2 / 37681
• FlyBaseID: FBgn0034834
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: NP_001022967.1
• Gene: uaf-1 / 175270
• WormBaseID: WBGene00006697
• Length: 496
• Species: Caenorhabditis elegans
• Alignment Length: 449
• Identity: 199/449 - (44%)
• Similarity: 260/449 - (57%)
• Gaps: 69/449 - (15%)

  Fly    15 RSRSRSRSRSR------SPFRSQSITRSRPTRSDTIYTERTRLQRRFSRPPSSWDIPPEGYNHLT 73
            |.|||||.|.|      .|.|......:|..|.......|...:.||      ||:||.|:...|
 Worm    92 RDRSRSRERRRGGGGRDEPRRRGGDDEARSRREPEPQKPREPKKYRF------WDVPPTGFETTT 150

  Fly    74 PQQYKAMLASGQIASRILSDGVHGGESAAISM----ITRQARRLYVGNIPFGVTDEEMMQFFNHQ 134
            |.:||.|.|:||:.        .|...:|:.:    :|.|:|||||||||||..:|.|:.|||.|
 Worm   151 PMEYKNMQAAGQVP--------RGSVQSAVPVVGPSVTCQSRRLYVGNIPFGCNEEAMLDFFNQQ 207

  Fly   135 IMALGFEAKSSHYMDGNAVLTCQTNLEKNFAFLEFRSIDEASQALNFDGMVFRGQTLKIRRPHDY 199
            :...|..     ...||.:|.||.||:|||||:|||||||.:..:.|||:.|.||.||:|||.||
 Worm   208 MHLCGLA-----QAPGNPILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFMGQQLKVRRPRDY 267

  Fly   200 QPVPSISVSAMESYRSFRVPAINVAQQPAVTLPVTTIVPDSPNKIYVGGLPTCLNQDQVKELLQS 264
            ||          |..:|.:.:         .:||:|||.||.|||::||||..|.:|||||||.|
 Worm   268 QP----------SQNTFDMNS---------RMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCS 313

  Fly   265 FGELKGLNLVMDTNTNLNKGFAFFEYCDPSVTDHAIAGLHGMLLGDRRLVVQ----------RSI 319
            ||.||..:|.:|:..| :||:||.||.||::||.|||||:||.|||::||||          .::
 Worm   314 FGPLKAFSLNVDSQGN-SKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQRHNTNL 377

  Fly   320 PGGKNAFPGHLPTVLQVPGISTLQDPGSPTETLCLLNMVRPEELLDDEEFEDIRTDIKQECAKFG 384
            |...:|          :.||...|..|..||.|||:|||..:||..|:|:|:|..|::.||:|:|
 Worm   378 PNSASA----------IAGIDLSQGAGRATEILCLMNMVTEDELKADDEYEEILEDVRDECSKYG 432

  Fly   385 EVRSIKIPRPIGQFPKRGCGKVFVQFESVEDSQKALKALSGRKFSGRIVMTSYYDPEKY 443
            .|||::||||....|..|.|||||:|.|..|.|:|..||:||||:.|.|:|||||.:||
 Worm   433 IVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTGRKFANRTVVTSYYDVDKY 491

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
LS2	NP_611769.2	U2AF_lg	35..447	CDD:273727	189/423 (45%)
uaf-1	NP_001022967.1	U2AF_lg	118..496	CDD:273727	189/423 (45%)