DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13539 and Aldh2

DIOPT Version :10

Sequence 1:NP_611768.1 Gene:CG13539 / 37680 FlyBaseID:FBgn0034833 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_115792.2 Gene:Aldh2 / 29539 RGDID:69219 Length:519 Species:Rattus norvegicus


Alignment Length:264 Identity:47/264 - (17%)
Similarity:77/264 - (29%) Gaps:127/264 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 VLFASGDMDQVIEAIVSDMIHPIGTGLVAS--VLVEESIRDEMIKRIRANLK------PMSERIQ 101
            ::.:..|||..:|.....:....|....|.  ..|:|.:.||.::|..|..|      |...|.:
  Rat   295 IIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDVYDEFVERSVARAKSRVVGNPFDSRTE 359

  Fly   102 HHPNYLKTVKLIDRMNCSTIHIEEFEESDTKKRYG----RRMKGSPLIVLDFPQFYFGG------ 156
            ..|                    :.:|:..||..|    .:.:|:.|:.        ||      
  Rat   360 QGP--------------------QVDETQFKKILGYIKSGQQEGAKLLC--------GGGAAADR 396

  Fly   157 ----KPTA------------------IMTMSTFRNMNEVV--KLHSREGL------------NF- 184
                :||.                  :|.:..|:.:.|||  ..:|:.||            |: 
  Rat   397 GYFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSKYGLAAAVFTKDLDKANYL 461

  Fly   185 ----DCITVWSAKLAQCFDLL--------------------------TRVPTVDQWTFNCTKESI 219
                ...|||    ..|:|:.                          |.|.||          ::
  Rat   462 SQALQAGTVW----INCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTV----------TV 512

  Fly   220 KVPK 223
            |||:
  Rat   513 KVPQ 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13539NP_611768.1 DUF1487 37..260 CDD:254173 47/264 (18%)
Aldh2NP_115792.2 SIFI-degron. /evidence=ECO:0000250|UniProtKB:P05091 12..26
ALDH_F1AB_F2_RALDH1 33..513 CDD:143459 44/259 (17%)
Blue background indicates that the domain is not in the aligned region.

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