DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment side-V and side-III

DIOPT Version :9

Sequence 1:NP_611765.2 Gene:side-V / 37679 FlyBaseID:FBgn0085400 Length:1174 Species:Drosophila melanogaster
Sequence 2:NP_001036681.1 Gene:side-III / 4379844 FlyBaseID:FBgn0083949 Length:1689 Species:Drosophila melanogaster


Alignment Length:1681 Identity:349/1681 - (20%)
Similarity:527/1681 - (31%) Gaps:705/1681 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 FVLVL-ATALSLVQGEQHPATADEGPLSEIL--TAVGSEVALPCDLVPGTGIVDKVQLVIWYRQG 77
            |.|.| |..:||..| |.....|:.|:|.:.  ..:|...:||||:.| ....|:|.:|:|:|:.
  Fly    29 FALFLFAAHISLTSG-QIDWDDDDDPVSTVAVEAVLGRTASLPCDIEP-EAKDDRVYMVLWFRES 91

  Fly    78 NVKPIYTFDARGRPLNLGIPWADESVFNKKAHFHHDTDPPALRIKNIQTSDAGLYKCRVDFHKSP 142
            ..||:|:||.||||....:.|:|.:.|..:|:|.....|..|.:.|||..|.|:|:|||||..||
  Fly    92 AGKPLYSFDVRGRPFEKALYWSDTNSFGPRAYFVTGQQPAKLSVDNIQLDDEGVYRCRVDFQNSP 156

  Fly   143 TRNWRINVTVLVPPTALTILDHHGAEIRDQTAGPYLEGDSIDLTCLSSGGVPPPRVSWWREHALI 207
            |||.|||:||:|||..:.:.|..|.::.. ..||.||||:|.|||...||.|.|.|:|.      
  Fly   157 TRNHRINLTVIVPPHQILVYDASGRDVAG-AVGPLLEGDNIVLTCEVRGGRPEPTVTWM------ 214

  Fly   208 DDSFQVLPDGS--------VRNVLRLKNIQRKDLLTMYTCQASNGHVVPALTKKVILDMNLPPLS 264
             :..:.|..||        ..|.|.:..|.|..|...|.|||||..:|..:.:.:.::|.|.|.|
  Fly   215 -NGTRTLEAGSGVSMGRHVTVNRLEVAQISRSALNNTYRCQASNTKLVAPVERSIRIEMLLKPTS 278

  Fly   265 LLLQGLNHAVIAGTRSHVTCTAIGARPPPEIIWSKAGQIVRGATSSTSSDGNTTISELMLIPVPE 329
            :.|........:.|:.::||...|:.|..||.|::..:..:....|||......||.|...|.||
  Fly   279 VNLTNKLKVFASNTQYNLTCIVAGSVPDTEIKWTQNNRPFKRGLLSTSQSNGRVISTLTFYPQPE 343

  Fly   330 DNERQVVCSISLNAGITSQQLHEGHTTVMTTLGNGHTGLYLKDSRVLNVTHAPIVNLNLGAPLDP 394
            |:...:.|              ||....:....       ::||.::||.:.|.|.|:||:.|.|
  Fly   344 DDGTMLKC--------------EGSNPRLQNSA-------IEDSLMMNVIYPPQVTLSLGSTLRP 387

  Fly   395 DNLLKGTDVYLECDVKANPAITRVEWYHSDKQL--HSSRGIIISNQTLVLQGISKSSHGQYFCRA 457
            |::.:|.|||.||.:|:||...|:.|.|..:.:  :.|.|||||.::||||.:.:...|.|.|.|
  Fly   388 DDIKEGDDVYFECHIKSNPKEHRIMWSHDGQPVTQNVSWGIIISTRSLVLQRVGRIHSGFYACSA 452

  Fly   458 SNLQGSVSSNEVYLDVKYPPVCKSES-TIIRAALKQTINITCEVDANPVDNLNYKW--------- 512
            :|.:|...|..|.|.::|.|||.|.| |:|.|:|::.:.|.|.|:::|.: ::::|         
  Fly   453 ANDRGETQSAPVNLRIRYAPVCSSSSITVIGASLEEDVPIPCRVNSDPPE-IDFEWTFSTSGEHF 516

  Fly   513 -------------------------------HFNNSLESLIEL---------------------- 524
                                           ||.:.:|::.||                      
  Fly   517 EVPSGHYATIQDPTMTTTSDVRRTVVESNETHFESYVETVSELIYTPKGERDYGTLACYGRNAIG 581

  Fly   525 -----------PQLGQGA-------PVMLASGSDQSG-------------YYQRSKRKHSHGMQQ 558
                       |....||       |.::.|.|..|.             .|.|.:..:.|....
  Fly   582 KQSDPCVFQVVPAAKPGALRNCTLRPYVVTSASLNSSNQTTMHANQILPTQYGRHESNYPHMEYV 646

  Fly   559 RLLHGRHG------RMAAVRFEDEDEDGYGEFEEYGDEVGQ------PFTQMVYSNMVHKNHVES 611
            |..|...|      ..||.|....:::..|.     ...||      ..||.....:..:.....
  Fly   647 RERHNSSGGNNNGTAPAAGRNNVANKNMRGR-----TSAGQAKSNNKQLTQQQLQRLKKRTSFTP 706

  Fly   612 S-------KQQQRKQLSPQQQQQQQQ--MASGGSSGDSHTPSGGVILE----------------- 650
            |       :|:||||||.||||.|||  .|:...||..:.|.|.....                 
  Fly   707 SQTLAAIERQRQRKQLSQQQQQLQQQHHQATATKSGGDNKPDGSPAKSSKQRMRRASRDPQIQQQ 771

  Fly   651 ----------------------------------------------------------------- 650
                                                                             
  Fly   772 QQHQQQQQHQLHAATSITSSQRKQAESNLSTSHLGKGSSSSSRSRRSSSSNINSKSNNGKQPAKY 836

  Fly   651 -RKRLVALHKQHHR-------------------------------------------------GG 665
             .||...:|||.|:                                                 ..
  Fly   837 FNKRQKNMHKQKHQQKLKQLKGTTNEHNSNIIHHYAALSSSLRRRKRLAANDILATVAAASTSAS 901

  Fly   666 VATPPTTTA-------------------------------------------------------- 674
            :::||.::|                                                        
  Fly   902 LSSPPASSAASLAATATAAVEIEQDVSAVDAPAADSGSNNKRSRKSLTILDKQKQQQEQQQLLPP 966

  Fly   675 -APPLNN-----VYSYHVESYESFGAISCVASSPMGHSAPC------------------------ 709
             ||.::|     :...:|:...:..|...||:. :...||.                        
  Fly   967 NAPQISNQPVAAISGNNVKETAATSAHGAVAAG-VKDKAPSSKEDSTDNDNDSDGDEDDDDDDDD 1030

  Fly   710 ---------------------WYHIQPADLPEPVKNCTA-------------------------- 727
                                 ..|...|||.|.|.....                          
  Fly  1031 GAEIDAETETNDEEEDEDEGGEAHDDDADLDEDVAQLATDADYLADGPGDLQEYETVEEVDGQAK 1095

  Fly   728 -------------------------------YN----------------ATA------------- 732
                                           ||                .||             
  Fly  1096 HVHMLSLEEQLDLESLEDNVEEEDDGEVDDMYNVSDDDFVASVALSTSDTTAATPLQRTTEGPHI 1160

  Fly   733 ----------------------------------------------------------------- 732
                                                                             
  Fly  1161 REKATQSQTQTDSATEWQLPHFDYSRMEYSFSNGVVTQSLLGGGAVTGAGHDGFAGGGTINFDNY 1225

  Fly   733 -----NSLQIQCIPGYDGGIPQHFHAQIYDELNRQILYNASYKYSEFTVKRLPSDSVFVIRITAV 792
                 ::::::|:||||||:.|.|..:.||....::..|.|..|.:..|.|:....:..:.....
  Fly  1226 DNIIYSTMELECMPGYDGGLQQQFFLEAYDSKTMKLRLNMSSTYMDVPVFRIDLSDLMPMDYYPD 1290

  Fly   793 NAQGASKVAYRLRGRTLSAPLL---------RTASSTAVLVQLTPLLGALVGVIATLILVAICVV 848
            .......|.|.:..:..|.|::         ...|...:.:.:.||...|.|.:.| :.:|:..|
  Fly  1291 AHPALHLVVYSVNQKGRSEPIVLENVPINEADKRSDGRMGLSILPLAALLAGTLFT-VGIAVLSV 1354

  Fly   849 IVIKFRSKRG-GRRH-------GSGADATTTEADKGSAEPLSRNMGSHSSLE---------DKNP 896
            :||..|.:|| |.|:       ..|.|.|.|       .||....| |..|.         :|.|
  Fly  1355 VVIAVRRRRGQGARNMCDDKDKHLGMDVTVT-------APLETGAG-HQRLVVAYTLKQGIEKQP 1411

  Fly   897 DVVPQEANSEDEFHQEEKAFDRLNMESQRILYTPPTRINTASPPPPSLSPTFGKQYGELSLTTNP 961
            |::..:.::                         ||..:.:||                      
  Fly  1412 DILSAQKSA-------------------------PTGGDASSP---------------------- 1429

  Fly   962 AFSLYNTPQRAPAVQRPVYTAPPPLLSTRTPPNIYTRIPGRGGGGGGATVTAAGA------GGYH 1020
                                     |..| |..::....|.|||||||...|:.|      ||:.
  Fly  1430 -------------------------LGNR-PSGLFAGGGGGGGGGGGAAGLASAAPMTGNTGGHK 1468

  Fly  1021 LPAYETRTSP--TSPYGSTTTCTMPLLGGQSNGSLQSGGVGGVGGLVG---GGA-----CNTLPH 1075
            ...|: ..:|  .||...::|.           .|:|....|.|||||   ||:     .:.:|.
  Fly  1469 TTDYD-GNAPHLNSPPSQSSTL-----------KLESDPAAGGGGLVGARSGGSNPPLLYDAMPT 1521

  Fly  1076 PGSLHVGGISAALTSSVTSGNITIGAAQSLLTSPRSQTATYSTTLGGVQSPLLMGG 1131
            .......|:|.|   |.::|..|.|::.:|  |....|.:.:....|...|   ||
  Fly  1522 LSRYEQLGLSMA---SYSAGAGTGGSSSTL--SSAGSTVSNAMAANGSAGP---GG 1569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-VNP_611765.2 Ig 42..153 CDD:299845 48/112 (43%)
IG_like 42..152 CDD:214653 47/111 (42%)
IGc2 179..245 CDD:197706 27/73 (37%)
IG_like 179..245 CDD:214653 27/73 (37%)
Ig <282..348 CDD:299845 18/65 (28%)
IGc2 400..459 CDD:197706 26/60 (43%)
FN3 719..798 CDD:214495 22/234 (9%)
side-IIINP_001036681.1 IG_like 59..166 CDD:214653 46/107 (43%)
V-set 59..166 CDD:284989 46/107 (43%)
ig 190..268 CDD:278476 29/84 (35%)
IG_like 192..259 CDD:214653 27/73 (37%)
Ig 296..361 CDD:299845 20/78 (26%)
IG_like 391..468 CDD:214653 31/76 (41%)
IGc2 392..454 CDD:197706 26/61 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I12487
eggNOG 1 0.900 - - E1_KOG3515
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D23448at33392
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23278
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1676
65.920

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