DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment side-V and side-IV

DIOPT Version :9

Sequence 1:NP_611765.2 Gene:side-V / 37679 FlyBaseID:FBgn0085400 Length:1174 Species:Drosophila melanogaster
Sequence 2:NP_001034052.2 Gene:side-IV / 41657 FlyBaseID:FBgn0038156 Length:1001 Species:Drosophila melanogaster


Alignment Length:1136 Identity:284/1136 - (25%)
Similarity:449/1136 - (39%) Gaps:344/1136 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LVQGEQHPATADEGPLSEILTAVGSEVALPCDLVPGTGIVDKVQLVIWYRQGNVKPIYTFDARGR 90
            |:|....|.     ||:.:...:|.:..||||:.|... .|.|.:|:|:|:|:.:|||.||.|||
  Fly    68 LMQNLDRPV-----PLTTVQGVLGRQAMLPCDISPQER-DDAVYMVLWFREGDGEPIYNFDVRGR 126

  Fly    91 PLNLGIPWADESVFNKKAHFHHDTDPPALRIKNIQTSDAGLYKCRVDFHKSPTRNWRINVTVLVP 155
            .......|:..:.|..:|||...|.|..|:|.||:..|.|:|:|||||..|||||.:||:||:||
  Fly   127 QFGQARLWSSPTAFGTRAHFSSTTHPAQLKIDNIRIEDEGVYRCRVDFRNSPTRNLKINLTVIVP 191

  Fly   156 PTALTILDHHGAEIRDQTAG---PYLEGDSIDLTCLSSGGVPPPRVSWWREHALIDDSFQVLPDG 217
            |....|...:    |.:.||   .:.||:.|.|:|..|||.|.|.|:|:.::..||:||:..|||
  Fly   192 PDRPVIYGQN----RHEKAGNVESFSEGNDIVLSCEVSGGRPRPNVTWYLDNTAIDESFEQRPDG 252

  Fly   218 SVRNVLRLKNIQRKDLLTMYTCQASNGHVVPALTKKVILDMNLPPLSLLLQGLNHAVIAGTRSHV 282
            ...|.|...|:.|:.|.:...|.|||.::.|...:.||||:||.|:::.:...:..|.|.....|
  Fly   253 KTINHLSYPNVGRQHLNSRLMCVASNTNLTPPNNRVVILDVNLKPIAVHILTKDRFVSADRTYDV 317

  Fly   283 TCTAIGARPPPEIIWSKAGQIVRGATSSTSSDGNTTISELMLIPVPEDNERQVVCSISLNAGITS 347
            .|.:.|::||..|.|.|..:.::..|.:.:...|.::|.|...|..||:.:.:.|.       ..
  Fly   318 ECKSSGSKPPALITWWKGSKQLKKLTKNFNEPDNQSLSILTFTPGREDDGKYLTCR-------AE 375

  Fly   348 QQLHEGHTTVMTTLGNGHTGLYLKDSRVLNVTHAPIVNLNLGAPLDPDNLLKGTDVYLECDVKAN 412
            .|..:|..              ::|...|.|.:.|...|.:|:.|:||::.:|.|.|.||.|.||
  Fly   376 NQFIDGSA--------------IEDKWRLIVHYQPTTTLKIGSSLNPDDIKEGDDAYFECIVLAN 426

  Fly   413 PAITRVEWYHSDKQL-HS-SRGIIISNQTLVLQGISKSSHGQYFCRASNLQGSVSSNEVYLDVKY 475
            |...::.|:|:.|:| |: |.|:|:|:|:||||.:|::|.|.|.|.|.|.:|...||.|.|.::|
  Fly   427 PKPYKMSWFHNGKELQHNISAGVILSDQSLVLQSVSRASAGDYTCLAVNSEGKGPSNPVTLRIRY 491

  Fly   476 PPVCKSESTIIRAALK-QTINITCEVDANPVDNLNYKWHFNNSLESLIELPQLGQGAPVMLASGS 539
            .|:|.::...:..||| :|:.:.||||::|..: :::|.||:|.|. .|||              
  Fly   492 APICATDHEELLGALKHETLPLKCEVDSSPPAD-SFQWTFNSSGEQ-TELP-------------- 540

  Fly   540 DQSGYYQRSKRKHSHGMQQRLLHGRHGRMAAVRFEDEDEDGYGEFEEYGDEVGQPFTQMVYSNMV 604
                     .|.||                                                   
  Fly   541 ---------ARLHS--------------------------------------------------- 545

  Fly   605 HKNHVESSKQQQRKQLSPQQQQQQQQMASGGSSGDSHTPSGGVILERKRLVALHKQHHRGGVATP 669
                                       :..|.|..::|||..:                      
  Fly   546 ---------------------------SETGMSRLNYTPSTDL---------------------- 561

  Fly   670 PTTTAAPPLNNVYSYHVESYESFGAISCVASSPMG-HSAPCWYHIQPADLPEPVKNCTAYNATAN 733
                                 .:|.|||.|.:.:| ..:||.:.|..|..|.|::||:..|.:.:
  Fly   562 ---------------------DYGTISCWAKNSIGTQKSPCVFQIVAAGRPFPLQNCSVTNQSVD 605

  Fly   734 SLQIQCIPGYDGGIPQHFHAQIYDELN-----RQILYNASYKYSEFTVKRLPSDSVFVIRITAVN 793
            |||:.|:.|:|||:||.|..::. |||     |.|  ..|:....|.:..|...:.:.:.|.|||
  Fly   606 SLQVDCLEGFDGGLPQGFMLELV-ELNTLRLARNI--TVSHTPVTFVIDNLDQAATYRMVIFAVN 667

  Fly   794 AQGASKVAYRLRGRTLSAPLLRTASSTAVLVQLTPLLGALVGVIATLILVAICVVIVIKFR--SK 856
            |:|.|:... :...........|.:||.:.:.|:|.|..|. :...|:....|:::...:|  |.
  Fly   668 AKGRSEPTI-IDDINFKGVAKFTGASTGLSMPLSPFLAGLT-LFCGLLFAIFCIMLAAIYRRISN 730

  Fly   857 R--------------------------------GGRRH--------------------------G 863
            |                                |...|                          |
  Fly   731 RRSDSNLKVAKHTQLTIPADCQLDPLHPGVQTDGSGNHQPHHSLLPLNCDGRNAVDCGALGDVGG 795

  Fly   864 SGADATTTEADKGSAEPL-------------SRN----MGSHSSLEDKNPDVVPQEANSEDEFHQ 911
            .|.........|||: |:             :||    |...:.::|.:|||:|.:         
  Fly   796 GGVGVGLDGGIKGSS-PIGLVAMPGDTLRSNARNRHSPMADQADIDDTDPDVIPNQ--------- 850

  Fly   912 EEKAFDRLNMESQRILYTPPTRINTASPPPPSLSPTFGKQ--------------------YGELS 956
                :::..::|   |.:||   ..|||....:...:.::                    .|.:|
  Fly   851 ----YEKRPLKS---LVSPP---GFASPSNRLMQRDYLRETELTKGGSDVGMGAAEGLSSIGLMS 905

  Fly   957 LTTNPAFSLYNTPQR----APAVQRPVYTAPPPL------LSTRTPPNIYTRIPGRGGGGGGATV 1011
            .:.|........|.:    |...::.:.|..|||      :||.||                   
  Fly   906 SSGNEVLHYTFRPSKQISYATLNKKGITTCSPPLGSLNYSVSTSTP------------------- 951

  Fly  1012 TAAGAGGYHLPAYETRTSPTSPYGSTTTCTM 1042
                ...|||.......|..||...:.|.::
  Fly   952 ----TSSYHLTPQPMEVSLLSPNNPSVTSSL 978

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-VNP_611765.2 Ig 42..153 CDD:299845 47/110 (43%)
IG_like 42..152 CDD:214653 46/109 (42%)
IGc2 179..245 CDD:197706 28/65 (43%)
IG_like 179..245 CDD:214653 28/65 (43%)
Ig <282..348 CDD:299845 16/65 (25%)
IGc2 400..459 CDD:197706 29/60 (48%)
FN3 719..798 CDD:214495 30/83 (36%)
side-IVNP_001034052.2 V-set 79..188 CDD:284989 46/109 (42%)
IG_like 80..188 CDD:214653 46/108 (43%)
Ig 210..281 CDD:299845 28/70 (40%)
Ig 319..392 CDD:299845 19/93 (20%)
IG_like 319..383 CDD:214653 17/70 (24%)
IG_like 412..489 CDD:214653 35/76 (46%)
IGc2 413..478 CDD:197706 30/64 (47%)
Ig_3 509..572 CDD:290638 27/208 (13%)
fn3 593..675 CDD:278470 30/84 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470109
Domainoid 1 1.000 41 1.000 Domainoid score I12487
eggNOG 1 0.900 - - E1_KOG3515
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D23448at33392
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23278
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1676
76.850

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