DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment side-V and side-VIII

DIOPT Version :9

Sequence 1:NP_611765.2 Gene:side-V / 37679 FlyBaseID:FBgn0085400 Length:1174 Species:Drosophila melanogaster
Sequence 2:NP_001097382.2 Gene:side-VIII / 37310 FlyBaseID:FBgn0086604 Length:1201 Species:Drosophila melanogaster


Alignment Length:1314 Identity:336/1314 - (25%)
Similarity:500/1314 - (38%) Gaps:436/1314 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 GP--LSE-ILTAVGSEVALPCDLVPGTGIVDKVQLVIWYRQGNVKPIYTFDARGRPLNLGIPWAD 100
            ||  ||| |:..||   .|||::.|.. ..|:|.|||||:.|...|||:.|.|......|..|:|
  Fly    55 GPPVLSESIMGTVG---RLPCNVTPPI-YEDRVALVIWYKVGLKTPIYSVDTRDSNFAQGTHWSD 115

  Fly   101 ESVFNKKAHFHHDTDPPALRIKNIQTSDAGLYKCRVDFHKSPTRNWRINVTVLVPPTALTILDHH 165
            |: :.::..||.:.....|.||:....|.|.|:|||||.||||||.::|:||::||.::.|||..
  Fly   116 ET-YRERLSFHVEGRAGTLTIKSTTEDDTGEYRCRVDFQKSPTRNSKVNLTVIIPPESVIILDSK 179

  Fly   166 GAEIRDQTAGPYLEGDSIDLTCLSSGGVPPPRVSWWREHALIDDSF--QVLPDGSVRNVLRLKNI 228
            |..|.|.|.|||.||..|::||::.||.|.|||:|...:.:..::.  |.|.:..|.|.|.|..:
  Fly   180 GVTIEDHTLGPYNEGSGINITCVAIGGRPQPRVTWLHGNTVYKNASVGQPLSERRVGNTLSLARL 244

  Fly   229 QRKDLLTMYTCQASNGHVVPALTKKVILDMNLPPLSLLLQGLNHAVIAGTRSHVTCTAIGARPPP 293
            :|::|....||:|.|.::...:...|:|||||.||.:.|||.|.|:.||....::|..|||||.|
  Fly   245 ERRNLHMQLTCRAENNNLTTPIISSVVLDMNLRPLIVKLQGENRALSAGNSYQLSCVVIGARPAP 309

  Fly   294 EIIWSKAGQIVRGATSSTSSDGNTTISELMLIPVPEDNERQVVCSISLNAGITSQQLHEGHTTVM 358
            .|.|.|....::......:.|||.|.|.|...|..:|..:.:.|              ....:::
  Fly   310 TITWWKGSTPMKNTHEIATPDGNLTTSVLTFTPTIDDRGKFLSC--------------RAEQSMI 360

  Fly   359 TTLGNGHTGLYLKDSRVLNVTHAPIVNLNLGAPLDPDNLLKGTDVYLECDVKANPAITRVEWYHS 423
            ...|       ::|...|::.|.|:|:|.||.......|.:|.||:.||::|:||.|..|.|.|:
  Fly   361 PESG-------MEDGWKLDIYHIPVVSLELGTNSLNSTLREGIDVFFECNIKSNPWIYEVSWRHN 418

  Fly   424 DKQL--HSSRGIIISNQTLVLQGISKSSHGQYFCRASNLQGSVSSNEVYLDVKYPPVCKSESTI- 485
            .|.|  :.:.||.:|||:||||..|::..|.|.|..||.:|...||.|.||:::.|||:....: 
  Fly   419 GKILTNNPAEGIAVSNQSLVLQNASRARSGIYTCVGSNREGDGESNPVQLDIRFAPVCRPRQRLS 483

  Fly   486 IRAALKQTINITCEVDANPVDNLNYKWHFNNSLESLIELPQLGQGAPVMLASGSDQSGYYQRSKR 550
            ..:...:|:.:.||:||||.: ..|.|.||                                   
  Fly   484 YSSGRHETVKVACEIDANPAE-ATYVWKFN----------------------------------- 512

  Fly   551 KHSHGMQQRLLHGRHGRMAAVRFEDEDEDGYGEFEEYGDEVGQPFTQMVYSNMVHKNHVESSKQQ 615
                                                                             
  Fly   513 ----------------------------------------------------------------- 512

  Fly   616 QRKQLSPQQQQQQQQMASGGSSGDSHTPSGGVILERKRLVALHKQHHRGGVATPPTTTAAPPLNN 680
                            |:.|.:.|  .|:..|.::|.|.:|    |:     ||.|.        
  Fly   513 ----------------ATQGETVD--IPASQVAVDRGRSIA----HY-----TPMTE-------- 542

  Fly   681 VYSYHVESYESFGAISCVASSPMG-HSAPCWYHIQPADLPEPVKNCTAYNATANSLQIQCIPGYD 744
                     ..:|.:.|.|::.:| .|.||.|.|.||..|:|:.|||..|.|:...||:||.|::
  Fly   543 ---------NDYGTLLCWATNEIGDQSEPCVYTIFPAGEPDPLLNCTVLNQTSTGFQIECIEGFN 598

  Fly   745 GGIPQHFHAQIYDELNRQILYNASYKYSEFTVKRLP-----------SDSVFVIRITAVNAQGAS 798
            ||:.|.|..::|        .|.:.::.:.:..:.|           ..:||:|   |.|::|.|
  Fly   599 GGLQQDFIMEVY--------MNGTTRHPKISKSKRPYFEVSGLVPGMGYNVFLI---ANNSKGRS 652

  Fly   799 KV----AYRLRGR---------TLSAPLLR--------TASSTA--------------------- 821
            ..    .|.|:..         |.|...||        ||::|:                     
  Fly   653 NATILQVYTLKDPEKQTVKITFTKSFQGLRPAYTKTKATATTTSDCVCDEDEFLNLGKGISHDEG 717

  Fly   822 ---------------VLVQLTPLLGALVGVIATLILVAICVVIVIKFRSKRGGRRH--------- 862
                           |:..:.|.||.|.|::.::.|||:.:|||::.|...|..|:         
  Fly   718 TDADQQEDLSLAYAPVIEDIRPFLGILAGIVGSIFLVALIIVIVVRVRGSSGRDRNNYSHPGSGV 782

  Fly   863 ------------------GSGADATTTEADKGSAEPL-SRNMGS--------------------- 887
                              |.|....||....||...| |.|.||                     
  Fly   783 GGVGGVGGTTGNGSGMGGGGGGVGGTTANGNGSLGLLASNNNGSLVIGTLGHNGGQSVQDMHRIG 847

  Fly   888 ----H--SSLE--DKNPDVVPQEANS-EDEFHQE--EKAFDRLNMESQRILYTPPTR-------- 933
                |  |||:  |||||::||:.:. :||:..:  .:.:....|..|..:.|..|.        
  Fly   848 RETCHVTSSLDSIDKNPDIIPQDGHDLDDEWTTKGHGRTYATAAMAEQNAVITSGTYDHLMPTYA 912

  Fly   934 -INTASPPPP---------SLSPTFGKQYGELSLTTNPAFSLYNTPQR----------APAVQRP 978
             ::..:.|||         :|.|.     .::....|....|...||:          ||.|..|
  Fly   913 VVDKKTAPPPGHGQYIQYNTLIPV-----SKMGAYANQQQQLQQQPQQKTELSYSELSAPLVSGP 972

  Fly   979 --VYTAPPPLLST-----------RTPPNIYTRI-----------------PGRGGGGGGATVTA 1013
              |....|...:|           |..||||:::                 .||....|......
  Fly   973 VGVQRMAPYCSATLGRPGRQAELKRAEPNIYSQVNVMMDDEILADLQAATASGRSYVAGAVVDNV 1037

  Fly  1014 AGAGGYHLPAYETRTS----PTSPYGSTTTCTMPLLGGQSNGSLQSGGVGGVGGLVGGGACNTLP 1074
            .||...::..|.||..    |...|.     |.|:.|..|.       :.||          |:.
  Fly  1038 GGAPNLYVQGYATRIDLAHHPMPMYS-----TSPMFGTNST-------ITGV----------TMS 1080

  Fly  1075 HPGSLHVGGISAALT----------SSVTSGNITIGAAQSLLTSPRSQTATYSTTLGG------- 1122
            ||..|      |..:          |.||:|:   |..|.:.......|::...::.|       
  Fly  1081 HPSQL------ATFSPTPPPPIFTHSMVTTGD---GLLQPVTCMGLVATSSAGASVPGPVPLAPQ 1136

  Fly  1123 --VQSPLLMGGGGN 1134
              .|..|....|||
  Fly  1137 QQQQQQLTAANGGN 1150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-VNP_611765.2 Ig 42..153 CDD:299845 47/111 (42%)
IG_like 42..152 CDD:214653 46/110 (42%)
IGc2 179..245 CDD:197706 24/67 (36%)
IG_like 179..245 CDD:214653 24/67 (36%)
Ig <282..348 CDD:299845 19/65 (29%)
IGc2 400..459 CDD:197706 27/60 (45%)
FN3 719..798 CDD:214495 25/89 (28%)
side-VIIINP_001097382.2 Ig 55..166 CDD:299845 49/115 (43%)
IG_like 60..166 CDD:214653 46/110 (42%)
Ig 182..266 CDD:299845 30/83 (36%)
Ig 296..373 CDD:299845 22/97 (23%)
IG_like 389..464 CDD:214653 31/74 (42%)
IGc2 394..459 CDD:197706 29/64 (45%)
Ig_3 490..554 CDD:290638 26/208 (13%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470098
Domainoid 1 1.000 42 1.000 Domainoid score I12438
eggNOG 1 0.900 - - E1_KOG3515
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D23448at33392
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23278
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1676
76.850

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