DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment side-V and side-II

DIOPT Version :9

Sequence 1:NP_611765.2 Gene:side-V / 37679 FlyBaseID:FBgn0085400 Length:1174 Species:Drosophila melanogaster
Sequence 2:NP_001014485.3 Gene:side-II / 3346206 FlyBaseID:FBgn0259213 Length:1064 Species:Drosophila melanogaster


Alignment Length:1165 Identity:308/1165 - (26%)
Similarity:476/1165 - (40%) Gaps:313/1165 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 EQHPATADEGPLSEILTAV-GSEVALPCDLVPGTGIVDKVQLVIWYRQGNVKPIYTFDARGR--- 90
            :.|..|.|       :.|| |..|:|||   |.|..:|.|.:|:|:|.....|:|:||.|.:   
  Fly    49 DSHVKTKD-------IDAVEGKSVSLPC---PITEPLDNVYMVLWFRDNAGIPLYSFDVRDKESR 103

  Fly    91 --PLNLGIPWADESVFNKKAHFHHDTDPPALRIKNIQTSDAGLYKCRVDFHKSPTRNWRINVTVL 153
              |.:    |:...||..:|.||.|:.|..|.||.   .|.|:|:|||||..|.|:::|.|::|:
  Fly   104 EQPRH----WSAPEVFGSRAKFHFDSQPATLEIKR---HDQGIYRCRVDFRTSQTQSFRFNLSVI 161

  Fly   154 VPPTALTILDHHGAEIRDQTAGPYLEGDSIDLTCLSSGGVPPPRVSWWREHALIDDSFQVLPDGS 218
            :.|....|:|..|.::.....||..|||.|.:||...||.|.|:|.|.....|:|:..:......
  Fly   162 ILPEQPIIMDRWGRQLNGTQLGPKQEGDDIVITCRVVGGRPQPQVRWLVNGLLVDNQNEHNSGDV 226

  Fly   219 VRNVLRLKNIQRKDLLTMYTCQASNGHVVPALTKKVILDMNLPPLSLLLQGLNHAVIAGTRSHVT 283
            :.|.|...::||.||.:::||||.|..:.....|..||||:|.||.:.:.....::||..|..|:
  Fly   227 IENRLLWPSVQRNDLNSVFTCQALNTQLDKPKEKSFILDMHLKPLVVKILEPPSSMIADRRYEVS 291

  Fly   284 CTAIGARPPPEIIWSKAGQIVRGATSSTSSDGNTTISELMLIPVPEDNERQVVCSISLNAGITSQ 348
            |.:.|:||...|.|.|..:.:|......|.  |:|.|||..:|..:|:.:.:.|... |..:   
  Fly   292 CESSGSRPNAIITWYKGKRQLRRTKDDISK--NSTRSELSFVPTTDDDGKSITCRAE-NPNV--- 350

  Fly   349 QLHEGHTTVMTTLGNGHTGLYLKDSRVLNVTHAPIVNLNLGAPLDPDNLLKGTDVYLECDVKANP 413
                             .||||:....|||.:.|:|.|.||:.|.||::.:|.|||.||.|::||
  Fly   351 -----------------NGLYLETMWKLNVVYPPLVTLRLGSTLTPDDIKEGDDVYFECHVQSNP 398

  Fly   414 AITRVEWYHSDKQL--HSSRGIIISNQTLVLQGISKSSHGQYFCRASNLQGSVSSNEVYLDVKYP 476
            ...::.|.|:...|  ::|..:|.|||:||||.|:|...|.|.|.|.|.:|...||::.|.|||.
  Fly   399 QWRKLLWLHNGIHLEHNTSARVIRSNQSLVLQKITKHYAGNYACSAINDEGETVSNQLPLRVKYT 463

  Fly   477 PVCKSESTI--IRAALKQTINITCEVDANPVDNLNYKWHFNNSLESLIELPQLGQGAPVMLASGS 539
            |:||....:  |.|:..:|:.:.||:.|:|... .::|.||||.|:|                  
  Fly   464 PMCKHADRVILIGASKDETVEVVCEIQADPPPR-TFRWKFNNSGETL------------------ 509

  Fly   540 DQSGYYQRSKRKHSHGMQQRLLHGRHGRMAAVRFEDEDEDGYGEFEEYGDEVGQPFTQMVYSNMV 604
                                                              :||            
  Fly   510 --------------------------------------------------DVG------------ 512

  Fly   605 HKNHVESSKQQQRKQLSPQQQQQQQQMASGGSSGDSHTPSGGVILERKRLVALHKQHHRGGVATP 669
                                   .::.:..||                                 
  Fly   513 -----------------------SERFSVNGS--------------------------------- 521

  Fly   670 PTTTAAPPLNNVYSYHVESYESFGAISCVASSPMG-HSAPCWYHIQPADLPEPVKNCTAYNATAN 733
                     .::..|...:.:.:|.:||.||:.:| ...||.:.:..|.||..|.|||.:|.|..
  Fly   522 ---------RSILKYTPVTDQDYGTLSCWASNEVGTQQHPCLFQVVLAALPNAVSNCTVFNRTEL 577

  Fly   734 SLQIQCIPGYDGGIPQHFHAQIYDE---LNRQILYNASYKYSEFTVKRLPS-DSVFV-------I 787
            |:.||||||||||:||.|..:::..   :.|..|.||  :.:.|:::.|.: .|:.|       :
  Fly   578 SVDIQCIPGYDGGLPQIFVLEMFSTRTGITRFNLSNA--EEALFSLENLDTLTSMMVQENNSLRL 640

  Fly   788 RITAVNAQGASKVAYRLRGRTLSAPLLRTASSTAVLVQLTPLLGALVGVIATLILVAICVVI--- 849
            ||.:.|.:|.| .||.|....:.:...:|...  |.:.|:|:   :||.:.|:|::.:.:.|   
  Fly   641 RIYSYNQKGRS-AAYLLTDFIIGSTAYKTDDD--VTLTLSPV---IVGSVLTIIIIGVAIAIRIF 699

  Fly   850 VIKF-RSKRGGRRHGSGADA---TTTEADKGSAEPLSRNMGSHSSL----------EDKNPDVVP 900
            |:.| .:.|..|.|||.|.|   |...:|......|.:....|:.:          ::::|||:|
  Fly   700 VVTFVHNLRRNRHHGSKATAAGVTAQPSDVFKGGNLEKPRWQHTDIKTKSSEDLVEDERDPDVIP 764

  Fly   901 QEANSEDEFHQEEKAFDRLNMESQRILYTPPTRINTASPPPPSL-SPTFGKQYGELSLTTNPAFS 964
            .:                         |...:...::.....:: |.|.|...|..:.|...|  
  Fly   765 SQ-------------------------YVGGSSAGSSGSNASNVGSTTAGTATGSSTSTAVVA-- 802

  Fly   965 LYNTPQRAPAVQRPVYTAPPPLLSTRTPPNIYTRIPGRGGGGGGATVTAAGAGGYHL----PAYE 1025
              |....|.|:                            .|.||||.:|:...|:..    .|..
  Fly   803 --NANAAASAM----------------------------AGPGGATSSASATDGHQFASGTAAAG 837

  Fly  1026 TRTSPTSPYGSTTTCTMPLLGGQSNGSL-------QSGGVGGVGGLVGGGACNTLPHPGSLHVGG 1083
            ...|..||.|:.|| || |.|...|.::       |...:......||||..:|:..|.|..:||
  Fly   838 GGASKWSPNGNVTT-TM-LTGDAVNATVTYNQINAQRAQLLAAVAAVGGGCSSTVISPSSSILGG 900

  Fly  1084 ISAALTSSVTSGNITIGAAQSLLTSPR--SQTATYSTTLGGVQS------PLLMGGGGNY 1135
            :...|...:..| :.:|...:::.||.  |.|||.:..|....|      |..:|.||.|
  Fly   901 LGKPLGMGMGMG-LGMGVGGTVIGSPTSLSSTATLAAHLQPAHSSGVGTLPPGLGSGGGY 959

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-VNP_611765.2 Ig 42..153 CDD:299845 43/116 (37%)
IG_like 42..152 CDD:214653 43/115 (37%)
IGc2 179..245 CDD:197706 25/65 (38%)
IG_like 179..245 CDD:214653 25/65 (38%)
Ig <282..348 CDD:299845 19/65 (29%)
IGc2 400..459 CDD:197706 27/60 (45%)
FN3 719..798 CDD:214495 33/89 (37%)
side-IINP_001014485.3 IG_like 55..160 CDD:214653 44/121 (36%)
Ig 57..160 CDD:299845 43/112 (38%)
Ig 188..251 CDD:299845 23/62 (37%)
Ig 289..363 CDD:299845 24/96 (25%)
IG_like 289..351 CDD:214653 19/84 (23%)
Ig_2 376..460 CDD:290606 35/83 (42%)
IG_like 383..454 CDD:214653 29/70 (41%)
Ig 470..548 CDD:299845 24/223 (11%)
IG_like 481..557 CDD:214653 25/221 (11%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470099
Domainoid 1 1.000 41 1.000 Domainoid score I12487
eggNOG 1 0.900 - - E1_KOG3515
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D23448at33392
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23278
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1676
76.850

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