DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment side-V and si:ch211-180a12.2

DIOPT Version :9

Sequence 1:NP_611765.2 Gene:side-V / 37679 FlyBaseID:FBgn0085400 Length:1174 Species:Drosophila melanogaster
Sequence 2:XP_001920945.3 Gene:si:ch211-180a12.2 / 100150385 ZFINID:ZDB-GENE-121214-236 Length:903 Species:Danio rerio


Alignment Length:1074 Identity:194/1074 - (18%)
Similarity:323/1074 - (30%) Gaps:396/1074 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 GPLSEILTAVGSEVALPCDL-VPGTGIVDKVQL-VIWYRQGNVKPIYTFDARGRPLN-LGIPWAD 100
            |...::..:.||...|.|.. :|  .:||...| :.|...|::.........|..|| ...|...
Zfish    18 GSSVDVSVSPGSSTVLNCSFALP--ALVDNSLLNITWSSGGSIIASKNHTQAGFFLNSTAFPSFP 80

  Fly   101 ESVFNKKAHFHHDTDPPALRIKNIQTSDAGLYKCRVDFHKSPTRNWRINVTVLVPPTALTILDHH 165
            .:|||...|                  ..|:|:|||.::.:.... .:.:|:|.||....|    
Zfish    81 LTVFNATPH------------------QQGVYECRVSYNDTDYAT-EVTLTILAPPVVSII---- 122

  Fly   166 GAEIRDQTAGPYLEGDSIDLTCLSSGGVPPPRVSWW-----------------REHALIDD-SF- 211
                   :....|:..|: :.|.:....||..:..|                 .|..|.|. || 
Zfish   123 -------SPEAVLKRKSV-VECWARSFSPPQIMFTWTRGGNKIQEPQKLQVNRTEDGLYDAVSFL 179

  Fly   212 QVLPDGSVRNVLRLKNIQRKDLLTMYTCQASNGHVVPALTKKVILDMN-----LPPLSL-LLQGL 270
            ..:|..|.:|:             .:.|:..:.    ||.|.|:.:..     ||.::| ::...
Zfish   180 TFIPQISNQNI-------------SFGCEVQHS----ALVKPVLEEFTPHITVLPKVTLSVVPSS 227

  Fly   271 NHAVIAGTRSHVT--CTAIGARPPP-EIIWSKAGQIVRGATSSTSSDGNTTISELMLIPVPEDNE 332
            :|:      |.||  |...|..|.. .::|...|:               .:|||.|....||. 
Zfish   228 SHS------SSVTLSCDISGFYPNNISVLWIHNGK---------------KLSELPLSIQNEDG- 270

  Fly   333 RQVVCSISLNAGITSQQLHEGHTTVMTTLGNGHTGLYLKDSRVLNVTHAPIVNLNLGAPLDPDNL 397
                          :.:.|:.||........|        ..|..|...|       :..:|.| 
Zfish   271 --------------TYRRHQYHTLTREERSRG--------GEVQCVALQP-------SGQEPAN- 305

  Fly   398 LKGTDVYLECDVKA-NPAITRVEWYHSDKQLHSSRGIIISNQTLVLQ---GISKSSHGQYFCRAS 458
              ||......|::. ||.:        :|...:|..::|.:.|||..   |.|       :.|..
Zfish   306 --GTIDLSTVDLRVQNPGL--------NKSAKASVAMMIISLTLVFLLCFGFS-------WKRRD 353

  Fly   459 NLQGSVSSNEVYLDVKYPPVCKSESTI-IRAALKQTINITCEVDANPVDNLNYK----------- 511
            ....|::.:.:.|..:.....|...|| :...|.:.:..|..::..|:.:.::|           
Zfish   354 EKLKSLNISAIVLPPRVVVGKKGRVTISVEGRLAERVQTTWFLNDIPIKDTSHKEKKYGAFRSAS 418

  Fly   512 WHFNNSLESLIELPQLGQGAPVMLASGSDQSGYY----QRSKRKHSHGMQQRLLHGRHGRMAAVR 572
            :...||..|:     |.:..|::.:|.   ||||    |...|..|:..:|        ..::|.
Zfish   419 YTSRNSSVSV-----LSEKNPLLPSSA---SGYYKLHTQMPLRSSSNSSKQ--------LFSSVT 467

  Fly   573 FEDEDEDGYGEFEEYGDEVGQPFTQMVYSNMVHKNHVESSKQQQRKQ--------------LSPQ 623
            |                         :.|..|||..|...:...:.:              |:|.
Zfish   468 F-------------------------IPSLAVHKGSVFKCQVSYKGKDKIVAERVSEKFTILAPP 507

  Fly   624 QQQQQQQMASGGSSGDSHTPSGGVILERKRLVALHKQHH-----------RGGVATP---PTTTA 674
            :..:.|        .......|||:     .:..|..|.           .||..:|   |...|
Zfish   508 EVSEIQ--------FSEPNEEGGVV-----TMTAHASHFHPDIITFRWFCEGGELSPVSIPQALA 559

  Fly   675 APPLNNVYSYHVESYESFGAIS-C---VASSPMGHSAPCWYHIQPADLPEPVK------------ 723
            ||        ..::...|.|:| |   .|....|.:. .|..|....|.:|:.            
Zfish   560 AP--------RPDAEGFFSAMSQCRLPKAELERGETR-VWVTIHHTALKQPITRQTRGFIKQPSI 615

  Fly   724 ----NCTAYNATANSLQIQC-IPGY----------------------------DGG--------I 747
                :|...:.....|.:.| |.|:                            ||.        :
Zfish   616 SEILSCPVASVLEGRLTLACEITGFYPPEISVKWLHSKGNEIEDGDDSEEEIKDGAEVWGPLQTL 680

  Fly   748 PQHFHAQI----YDELNR--QILYNAS-----------YKYSEFTVKRLP--------SDSVFVI 787
            |:.|.|:.    .:|:.|  ||:...|           ::.:......:|        ||.|.:.
Zfish   681 PRTFRAKALLKDVNEMTRGGQIICRVSHCCLLKPVDRVWRNTHTVAPSIPPSLSVHWSSDGVGIF 745

  Fly   788 RITAVNAQGASKVAYRLRGRTLSAPLLRTASSTAVLVQLTPLLGALVGVIATLILVAICVVIVIK 852
            .|.....:.:::|.:...|.|||    |..|.........          ..|.|.::|.::...
Zfish   746 SIVLCGGRPSAEVLWAAGGSTLS----RLQSKERERENNE----------GKLELKSVCALVRST 796

  Fly   853 FRSKRGGRRHGSGA---------------------DATTTEADKGSAEPLSRNMGSHSSLEDKNP 896
            .|.....|| |:.|                     |...:..::...||     ..|:...|:|.
Zfish   797 GRKDSESRR-GTHARKIRPPSVDFNTDYEKVNECVDGLKSVQEEKQPEP-----NKHTKENDENE 855

  Fly   897 DVVPQEANSEDEFHQEEKAFDRLNME-SQRILYT 929
            |:.|...|:.           ||..| |:|:..|
Zfish   856 DMHPSHVNTV-----------RLRKEKSERLRVT 878

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-VNP_611765.2 Ig 42..153 CDD:299845 24/113 (21%)
IG_like 42..152 CDD:214653 23/112 (21%)
IGc2 179..245 CDD:197706 14/84 (17%)
IG_like 179..245 CDD:214653 14/84 (17%)
Ig <282..348 CDD:299845 13/68 (19%)
IGc2 400..459 CDD:197706 14/62 (23%)
FN3 719..798 CDD:214495 21/156 (13%)
si:ch211-180a12.2XP_001920945.3 Ig 19..114 CDD:299845 24/115 (21%)
IG_like 22..113 CDD:214653 23/111 (21%)
C1-set 123..205 CDD:284964 18/99 (18%)
IgC 237..309 CDD:143166 22/119 (18%)
IgC 515..604 CDD:143166 22/102 (22%)
IgC 609..720 CDD:143166 15/110 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3515
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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