DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9899 and Cdc23

DIOPT Version :10

Sequence 1:NP_611764.1 Gene:CG9899 / 37676 FlyBaseID:FBgn0034829 Length:922 Species:Drosophila melanogaster
Sequence 2:NP_610036.2 Gene:Cdc23 / 35315 FlyBaseID:FBgn0032863 Length:678 Species:Drosophila melanogaster


Alignment Length:477 Identity:93/477 - (19%)
Similarity:171/477 - (35%) Gaps:133/477 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 RELYKAYALLATYLSNHAFKII---------KSRPAFQAMAINCFDQLD-----SLRQ---QHDP 91
            |..:.|:..|..||::...||.         ||......||:...::.|     .|.|   :.||
  Fly   217 RHFFMAHTYLELYLNDDGLKIYEDLQASGFSKSIYLIAQMALVYHNKRDVDKAIELYQALLESDP 281

  Fly    92 H----LQVTKGFLWM--LSSSRAQDADALLISVLRNHPKNILALIGRACLAYN----RQDYIGAL 146
            :    :......|::  :.:..||.|.. .:|:.:..|:.       .|:..|    |.|:..|:
  Fly   282 YRLDNVDTYSNLLFVKEMKTEMAQLAHK-AVSINKYRPET-------CCVIGNYYSIRCDHQVAI 338

  Fly   147 GYFKSVLLIQPQGMADVWVGIGHCFWKMGELEKAQLSFQIALEHNGQCLNA----ALALALVKFE 207
            .||:..|.:.|:.:| .|..:||.|.::.....|..|::.|:|.|.:...|    ..|..::|..
  Fly   339 SYFQRALKLNPKYLA-AWTLMGHEFMELKNTNAAIQSYRKAVEVNKRDYRAWYGLGQAYEIIKMH 402

  Fly   208 HNDEQSYQ--------DGKML--LTAAYKENNKNPDLLSILAGMYYADGNHKLVWSFAGNAIKFT 262
            :.....::        |.:||  |...|::.:|             .:...|..|       |..
  Fly   403 YYSLYYFKIAHQLRPYDSRMLVALGETYEKLDK-------------CENAVKCYW-------KAI 447

  Fly   263 ANKHIESRNYFQIAKSYHATGQFESAKKYYLL---SAKSAPD------GYILPLVGVAQMYLHEG 318
            ....||....:::|..:...|..|:|...|::   ..::|.|      |:|.    :|..|..:|
  Fly   448 DVGDIEGIAMYKLANLHEKLGDHETAVHCYIMYCEDERAATDKQSLYQGFIT----LANYYEKKG 508

  Fly   319 ELNRSKAFLESFLTSEPDEPVVMDLLAKIYLEYKCPEKIDKAIE--MLVKVVESASYHQNTNSWL 381
            |..|:                       .|..|||.:..|:.:|  .|:|.::          |.
  Fly   509 EYERA-----------------------AYYAYKCLDSEDRKMEAKALLKTID----------WK 540

  Fly   382 NLAFAYEQKRLWAHGVNAYQKAIDIYLSQGHQIPIEWLNNLASSQLMAKMPEKALNTLDDALSKC 446
            ..|...::.:......||...:.|         .:||    ....:..::|..::.|  ...|..
  Fly   541 RNAEGQKKVKTSTAVANADTSSED---------EMEW----ELQDVRVRVPITSIAT--TTTSTT 590

  Fly   447 RVMNSDNKTTNLLSLQYNRGLV 468
            .|......:::|:||:.:|.|:
  Fly   591 TVAAESASSSSLISLRPDRNLI 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9899NP_611764.1 PEP_TPR_lipo <108..745 CDD:274350 76/390 (19%)
TPR repeat 125..155 CDD:276809 8/33 (24%)
TPR repeat 161..189 CDD:276809 8/27 (30%)
TPR repeat 272..297 CDD:276809 5/27 (19%)
TPR repeat 303..333 CDD:276809 6/29 (21%)
TPR repeat 338..369 CDD:276809 8/32 (25%)
TPR repeat 376..406 CDD:276809 4/29 (14%)
TPR repeat 416..444 CDD:276809 4/27 (15%)
TPR repeat 458..488 CDD:276809 5/11 (45%)
TPR repeat 493..520 CDD:276809
TPR repeat 580..605 CDD:276809
TPR repeat 610..640 CDD:276809
TPR repeat 645..673 CDD:276809
TPR repeat 680..710 CDD:276809
Cdc23NP_610036.2 ANAPC8 13..119 CDD:427675
LapB 255..521 CDD:442196 63/321 (20%)
TPR repeat 255..278 CDD:276809 5/22 (23%)
TPR repeat 318..346 CDD:276809 8/34 (24%)
TPR repeat 351..381 CDD:276809 8/30 (27%)
TPR repeat 386..414 CDD:276809 3/27 (11%)
TPR repeat 420..448 CDD:276809 8/47 (17%)
TPR repeat 454..477 CDD:276809 4/22 (18%)
TPR repeat 494..522 CDD:276809 11/54 (20%)
Blue background indicates that the domain is not in the aligned region.

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