DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gpdh2 and gpsA

DIOPT Version :10

Sequence 1:NP_611760.2 Gene:Gpdh2 / 37672 FlyBaseID:FBgn0034825 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_418065.1 Gene:gpsA / 948125 ECOCYCID:EG20091 Length:339 Species:Escherichia coli


Alignment Length:356 Identity:87/356 - (24%)
Similarity:148/356 - (41%) Gaps:46/356 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IIGSGNWATTIARNVGRNVLNSQTLDEKVPMYVYEEIVEGRKLTEI--INTTHINSKYMPNFELP 70
            :||:|::.|.:|..:.||              .:|.::.|.....|  :.....|:.::|:...|
E. coli    10 VIGAGSYGTALAITLARN--------------GHEVVLWGHDPEHIATLERDRCNAAFLPDVPFP 60

  Fly    71 PNIVAVDDIVTTARDADIIIFAIPPTFVSSCCKTLLGKVKPTAHAVSLIKGFERGDDGQFVLISQ 135
            ..:....|:.|....:..|:..:|........:.:...::|.|..|...||.| .:.|:  |:..
E. coli    61 DTLHLESDLATALAASRNILVVVPSHVFGEVLRQIKPLMRPDARLVWATKGLE-AETGR--LLQD 122

  Fly   136 IIMRQL--KIPCSVLVGCNLAHELAHDHFAEGTVGCRDQKYYRVLHDIFK-SPTFRVVVTEDADC 197
            :....|  :||.:|:.|...|.|||.......::...||.:...|..:.. ..:|||....|...
E. coli   123 VAREALGDQIPLAVISGPTFAKELAAGLPTAISLASTDQTFADDLQQLLHCGKSFRVYSNPDFIG 187

  Fly   198 VEICSTLRNIIAFAAGCSDGMELNENTKGGIIRRGFLEMLQFVDVFYPGCRMG----TFFESCGI 258
            |::...::|:||..||.|||:....|.:..:|.||..||.:.      |..:|    ||....|:
E. coli   188 VQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLAEMSRL------GAALGADPATFMGMAGL 246

  Fly   259 SDLVTSCYAN--RNRKLAEAFVKTGKPLSELEHI--LIPGHEPLGPVTAELVHHMLKKKGLEDKF 319
            .|||.:|..|  |||:......:.....|..|.|  ::.|:.....| .||.|..    |:|  .
E. coli   247 GDLVLTCTDNQSRNRRFGMMLGQGMDVQSAQEKIGQVVEGYRNTKEV-RELAHRF----GVE--M 304

  Fly   320 PLFTTVYRI--CTGDYPLQRLVETLIKARED 348
            |:...:|::  | |....:..:..|.:||:|
E. coli   305 PITEEIYQVLYC-GKNAREAALTLLGRARKD 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpdh2NP_611760.2 glycerol3P_DH 6..342 CDD:274551 83/348 (24%)
gpsANP_418065.1 gpsA 6..330 CDD:234629 84/350 (24%)

Return to query results.
Submit another query.