DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpdh2 and GPDHp

DIOPT Version :10

Sequence 1:NP_611760.2 Gene:Gpdh2 / 37672 FlyBaseID:FBgn0034825 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_198877.1 Gene:GPDHp / 834060 AraportID:AT5G40610 Length:400 Species:Arabidopsis thaliana


Alignment Length:354 Identity:141/354 - (39%)
Similarity:215/354 - (60%) Gaps:17/354 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KIMICIIGSGNWATTIARNVGRNVLNSQTLDEKVPMYVYEEIV-EGRKLTEIINTTHINSKYMPN 66
            |..:.::|||||.:..|:.:..|.|...:..::|.|:|:||:: .|.||.::||.|:.|.||:|.
plant    54 KSKVTVVGSGNWGSVAAKLIASNALKLPSFHDEVRMWVFEEVLPNGEKLNDVINKTNENVKYLPG 118

  Fly    67 FELPPNIVAVDDIVTTARDADIIIFAIPPTFVSSCCKTLLGKVKPTAHAVSLIKGFERGDDGQFV 131
            .:|..|:||..|:....:||::::|..|..|:...||.|.||:.....|:||:||.|...:|. .
plant   119 IKLGRNVVADPDLENAVKDANMLVFVTPHQFMDGICKKLDGKITGDVEAISLVKGMEVKKEGP-C 182

  Fly   132 LISQIIMRQLKIPCSVLVGCNLAHELAHDHFAEGTVGCRDQKYYRVLHD----IFKSPTFRVVVT 192
            :||.:|.:||.|.|.||:|.|:|:|:|.:.|:|.|||.|..   |.:.|    :|.:|.|.|...
plant   183 MISSLISKQLGINCCVLMGANIANEIAVEKFSEATVGYRGS---REIADTWVQLFSTPYFMVTPV 244

  Fly   193 EDADCVEICSTLRNIIAFAAGCSDGMELNENTKGGIIRRGFLEMLQFVDVFYPGCRMGTFFESCG 257
            .|.:.||:|.||:|::|.|||..||:|:..|||..|:|.|..||.....:.:|..:..|||||||
plant   245 HDVEGVELCGTLKNVVAIAAGFVDGLEMGNNTKAAIMRIGLREMKALSKLLFPSVKDSTFFESCG 309

  Fly   258 ISDLVTSCYANRNRKLAEAFVKT-GK-PLSELEHILIPGHEPLGPVTAELVHHMLKKKGLEDKFP 320
            ::|::|:|...|||::||||.|: || ...|||..::.|.:..|..||..|:.:||..|..:.||
plant   310 VADVITTCLGGRNRRVAEAFAKSRGKRSFDELEAEMLQGQKLQGVSTAREVYEVLKHCGWLEMFP 374

  Fly   321 LFTTVYRICTGDYPLQRL-VETLIKARED 348
            ||:||::||||     || .|.:::.||:
plant   375 LFSTVHQICTG-----RLQPEAIVQYREN 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpdh2NP_611760.2 glycerol3P_DH 6..342 CDD:274551 138/343 (40%)
GPDHpNP_198877.1 glycerol3P_DH 56..395 CDD:274551 138/347 (40%)

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