DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpdh2 and Gpd1

DIOPT Version :10

Sequence 1:NP_611760.2 Gene:Gpdh2 / 37672 FlyBaseID:FBgn0034825 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_071551.2 Gene:Gpd1 / 60666 RGDID:621381 Length:349 Species:Rattus norvegicus


Alignment Length:350 Identity:159/350 - (45%)
Similarity:222/350 - (63%) Gaps:8/350 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ICIIGSGNWATTIARNVGRNVLNSQTLDEKVPMYVYEEIVEGRKLTEIINTTHINSKYMPNFELP 70
            :||:|||||.:.||:.||.|.......|.:|.|:|:||.:.||||||||||.|.|.||:|..:||
  Rat     6 VCIVGSGNWGSAIAKIVGSNASQLAHFDPRVTMWVFEEDIGGRKLTEIINTQHENVKYLPGHKLP 70

  Fly    71 PNIVAVDDIVTTARDADIIIFAIPPTFVSSCCKTLLGKVKPTAHAVSLIKGFERGDDGQFVLISQ 135
            ||:|||.|:|..|..|||::|.:|..|:...|..|.|.:|.....:|||||.:.|.:| ..|||:
  Rat    71 PNVVAVPDVVQAATGADILVFVVPHQFIGKICDQLKGHLKANTIGISLIKGIDEGPNG-LKLISE 134

  Fly   136 IIMRQLKIPCSVLVGCNLAHELAHDHFAEGTVGCRDQKYYRVLHDIFKSPTFRVVVTEDADCVEI 200
            :|...|.||.|||:|.|:|.|:|.:.|.|.|:||:|....::|.::.::|.||:.|.::.|.|||
  Rat   135 VIGESLGIPMSVLMGANIASEVAEEKFCETTIGCKDPAQGQLLKELMQTPNFRITVVQEVDTVEI 199

  Fly   201 CSTLRNIIAFAAGCSDGMELNENTKGGIIRRGFLEMLQFVDVFYPG-CRMGTFFESCGISDLVTS 264
            |..|:||:|..||..||:...:|||..:||.|.:||:.|..:|..| ....||.||||::||:|:
  Rat   200 CGALKNIVAVGAGFCDGLGFGDNTKAAVIRLGLMEMIAFAKLFCSGSVSSATFLESCGVADLITT 264

  Fly   265 CYANRNRKLAEAFVKTGKPLSELEHILIPGHEPLGPVTAELVHHMLKKKGLEDKFPLFTTVYRIC 329
            ||..||||:||||.:|||.:.:||..::.|.:..||.||..:|.:|:.|||.|||||||.||::|
  Rat   265 CYGGRNRKVAEAFARTGKSIEQLEKEMLNGQKLQGPQTARELHSILQHKGLVDKFPLFTAVYKVC 329

  Fly   330 TGDYPLQRLVETLIKAREDIFHPLH 354
            ....|:...:..|..      ||.|
  Rat   330 YEGQPVGEFICCLQN------HPEH 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpdh2NP_611760.2 glycerol3P_DH 6..342 CDD:274551 155/336 (46%)
Gpd1NP_071551.2 glycerol3P_DH 5..342 CDD:274551 155/336 (46%)

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