DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpdh2 and gpd1l

DIOPT Version :10

Sequence 1:NP_611760.2 Gene:Gpdh2 / 37672 FlyBaseID:FBgn0034825 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_001005934.1 Gene:gpd1l / 449663 ZFINID:ZDB-GENE-041010-220 Length:351 Species:Danio rerio


Alignment Length:353 Identity:154/353 - (43%)
Similarity:226/353 - (64%) Gaps:9/353 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IMICIIGSGNWATTIARNVGRNVLNSQTLDEKVPMYVYEEIVEGRKLTEIINTTHINSKYMPNFE 68
            :.:||:|||||.:.|||.:|.|....|.....|.|:||||:|.|:||:|||||.|.|.||:|.::
Zfish     5 LKVCIVGSGNWGSAIARIIGSNAQKLQCFATTVKMWVYEEMVNGKKLSEIINTEHENVKYLPGYK 69

  Fly    69 LPPNIVAVDDIVTTARDADIIIFAIPPTFVSSCCKTLLGKVKPTAHAVSLIKGFERGDDGQFVLI 133
            ||.|:|||..:...|..||:::|.:|..|:...|..::|.|...|..::||||.:.|.:| ..||
Zfish    70 LPENVVAVPQLRDAADGADLLVFVVPHQFIRKLCDEMMGCVSERARGITLIKGIDEGPEG-LKLI 133

  Fly   134 SQIIMRQLKIPCSVLVGCNLAHELAHDHFAEGTVGCRDQKYYRVLHDIFKSPTFRVVVTEDADCV 198
            |.||..::.|..|||:|.|:|:|:|.:.|.|.|:|.:..:...:..|:.::|.||:.|.:|||.|
Zfish   134 SDIIREKMGIDVSVLMGANIANEVAAEKFCESTIGSKVLENGLLFKDLLQTPNFRITVVDDADTV 198

  Fly   199 EICSTLRNIIAFAAGCSDGMELNENTKGGIIRRGFLEMLQFVDVFY--PGCRMGTFFESCGISDL 261
            |:|..|:||:|..||..||::..:|||..:||.|.:||:.|..:|.  ......||.||||::||
Zfish   199 ELCGALKNIVAVGAGFCDGLQCGDNTKAAVIRLGLMEMIAFAKLFSKDDSVSSATFLESCGVADL 263

  Fly   262 VTSCYANRNRKLAEAFVKTGKPLSELEHILIPGHEPLGPVTAELVHHMLKKKGLEDKFPLFTTVY 326
            :|:||..|||::||||.||||.:.|||..::.|.:..||:|:..|:|:||:|||.:||||||.||
Zfish   264 ITTCYGGRNRRVAEAFAKTGKSIEELEKEMLNGQKLQGPLTSAEVYHILKQKGLVEKFPLFTAVY 328

  Fly   327 RICTGDYPLQRLVETLIKAREDIFHPLH 354
            :||..|.|::.::..|..      ||.|
Zfish   329 QICFEDKPVRDMITCLQS------HPEH 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpdh2NP_611760.2 glycerol3P_DH 6..342 CDD:274551 150/337 (45%)
gpd1lNP_001005934.1 glycerol3P_DH 6..344 CDD:274551 150/338 (44%)

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