DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpdh2 and gpd1

DIOPT Version :10

Sequence 1:NP_611760.2 Gene:Gpdh2 / 37672 FlyBaseID:FBgn0034825 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_001006808.1 Gene:gpd1 / 448519 XenbaseID:XB-GENE-1003323 Length:348 Species:Xenopus tropicalis


Alignment Length:352 Identity:155/352 - (44%)
Similarity:223/352 - (63%) Gaps:8/352 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IMICIIGSGNWATTIARNVGRNVLNSQTLDEKVPMYVYEEIVEGRKLTEIINTTHINSKYMPNFE 68
            :.:||:|||||.:.||:.||.|.......|..|.|:|:||::.|:|||||||:.|.|.||:|..:
 Frog     3 LKVCIVGSGNWGSAIAKIVGDNAARLPQFDNVVKMWVFEELIGGKKLTEIINSDHENVKYLPGHK 67

  Fly    69 LPPNIVAVDDIVTTARDADIIIFAIPPTFVSSCCKTLLGKVKPTAHAVSLIKGFERGDDGQFVLI 133
            ||.|:|||.|::..:..|||:||.:|..|:...|..|...||..|..:|||||.:.|.:| ..||
 Frog    68 LPANVVAVPDLLEASAGADILIFVVPHQFIGKLCDQLKAHVKKEAFGMSLIKGVDEGPEG-LRLI 131

  Fly   134 SQIIMRQLKIPCSVLVGCNLAHELAHDHFAEGTVGCRDQKYYRVLHDIFKSPTFRVVVTEDADCV 198
            |.||..:|.|..|||:|.|:|:|:|...|.|.|:||:::::.::|.::|::|.||:.|.|:.|.|
 Frog   132 SDIIQERLGIQMSVLMGANIANEVADGKFCETTIGCKNKEHGKILKELFQTPNFRITVVEEKDTV 196

  Fly   199 EICSTLRNIIAFAAGCSDGMELNENTKGGIIRRGFLEMLQFVDVFYPG-CRMGTFFESCGISDLV 262
            |||..|:||:|..||..||:...:|||..:||.|.:||:.|..:|..| ....||.||||::||:
 Frog   197 EICGALKNIVAVGAGFCDGLGFGDNTKAAVIRLGLMEMIAFAKLFCSGSVTSATFLESCGVADLI 261

  Fly   263 TSCYANRNRKLAEAFVKTGKPLSELEHILIPGHEPLGPVTAELVHHMLKKKGLEDKFPLFTTVYR 327
            |:||..||||:.|||.:|||.:.:||..::.|.:..||.|:..::|:||.|.|..||||||.||:
 Frog   262 TTCYGGRNRKVGEAFARTGKSIEQLEQEMLNGQKLQGPQTSAELNHILKNKNLVGKFPLFTAVYQ 326

  Fly   328 ICTGDYPLQRLVETLIKAREDIFHPLH 354
            ||....|:...:..|..      ||.|
 Frog   327 ICYEGKPVTEFITCLQN------HPEH 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpdh2NP_611760.2 glycerol3P_DH 6..342 CDD:274551 151/336 (45%)
gpd1NP_001006808.1 glycerol3P_DH 4..341 CDD:274551 151/337 (45%)

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