DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpdh2 and gpd1c

DIOPT Version :10

Sequence 1:NP_611760.2 Gene:Gpdh2 / 37672 FlyBaseID:FBgn0034825 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_999918.1 Gene:gpd1c / 406615 ZFINID:ZDB-GENE-040426-2576 Length:349 Species:Danio rerio


Alignment Length:353 Identity:153/353 - (43%)
Similarity:222/353 - (62%) Gaps:14/353 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ICIIGSGNWATTIARNVGRNVLNSQTLDEKVPMYVYEEIVEGRKLTEIINTTHINSKYMPNFELP 70
            :||||||||.:.||:.||.||.:|...:..|.|:||||:::||||||||||.|.|.||:|..:||
Zfish     6 VCIIGSGNWGSAIAKIVGHNVKSSNRFEPLVKMWVYEEMIDGRKLTEIINTEHENVKYLPGHKLP 70

  Fly    71 PNIVAVDDIVTTARDADIIIFAIPPTFVSSCCKTLLGKVKPTAHAVSLIKGFERGDDGQFVLISQ 135
            ..:|||.|:...|..||.:||.||..|:...|..:...:||.|..:|||||.:.|.|| ..|||.
Zfish    71 KTVVAVPDVTEAASGADFLIFVIPHQFIVRVCDQMKPHIKPGAIGISLIKGIDEGPDG-LTLISD 134

  Fly   136 IIMRQLKIPCSVLVGCNLAHELAHDHFAEGTVGCRDQKYYRVLHDIFKSPTFRVVVTEDADCVEI 200
            ||..:|:|...||:|.|:|.|:|.:.|.|.|:|..::...::..::.::|.||:.|.:::|.||:
Zfish   135 IIRAKLEIEVCVLMGANIASEVADEKFCETTIGATNEASGKLFKELLQTPNFRITVVKESDTVEL 199

  Fly   201 CSTLRNIIAFAAGCSDGMELNENTKGGIIRRGFLEMLQFVDVFYPGCR----MGTFFESCGISDL 261
            |..|:||:|..||..||:...:|||..:||.|.:||:.|..:|   |:    ..||.||||::||
Zfish   200 CGALKNIVAVGAGFCDGLGFGDNTKAAVIRLGLMEMVAFSKLF---CKSSVSSATFLESCGVADL 261

  Fly   262 VTSCYANRNRKLAEAFVKTGKPLSELEHILIPGHEPLGPVTAELVHHMLKKKGLEDKFPLFTTVY 326
            :|:||..|||::||||.:|.|.:.|||..::.|.:..||.|:..|:.:|.|:.:.||||||.:||
Zfish   262 ITTCYGGRNRRVAEAFARTQKSIVELEAEMLNGQKLQGPQTSAEVYKILHKRNITDKFPLFVSVY 326

  Fly   327 RICTGDYPLQRLVETLIKAREDIFHPLH 354
            :||...    |.|:..|...::  ||.|
Zfish   327 QICFEG----RQVKDFINCLQN--HPEH 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpdh2NP_611760.2 glycerol3P_DH 6..342 CDD:274551 149/339 (44%)
gpd1cNP_999918.1 glycerol3P_DH 5..342 CDD:274551 150/343 (44%)

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