DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpdh2 and gpd1l

DIOPT Version :10

Sequence 1:NP_611760.2 Gene:Gpdh2 / 37672 FlyBaseID:FBgn0034825 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_989027.1 Gene:gpd1l / 394623 XenbaseID:XB-GENE-969902 Length:352 Species:Xenopus tropicalis


Alignment Length:352 Identity:154/352 - (43%)
Similarity:233/352 - (66%) Gaps:8/352 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IMICIIGSGNWATTIARNVGRNVLNSQTLDEKVPMYVYEEIVEGRKLTEIINTTHINSKYMPNFE 68
            :.:||:|||||.:.:|:.:|.||.|.:.....|.|:|:||.:.||||||||||.|.|.||:|.::
 Frog     7 LKVCIVGSGNWGSAVAKIIGHNVKNLKKFASTVNMWVFEENINGRKLTEIINTEHENVKYLPGYK 71

  Fly    69 LPPNIVAVDDIVTTARDADIIIFAIPPTFVSSCCKTLLGKVKPTAHAVSLIKGFERGDDGQFVLI 133
            ||.|:|||.::....:|||::||.||..|:...|:.:.|||...|..::||||.:.|.:| ..||
 Frog    72 LPENVVAVPNLSDAVKDADLLIFVIPHQFIHKICQEISGKVHRNALGITLIKGIDEGPEG-LRLI 135

  Fly   134 SQIIMRQLKIPCSVLVGCNLAHELAHDHFAEGTVGCRDQKYYRVLHDIFKSPTFRVVVTEDADCV 198
            |.||..::.|..|||:|.|:|:|:|.:.|.|.|:|.:::::..:..::.::|.||:.|.||||.|
 Frog   136 SDIIREKMDIDVSVLMGANIANEVAAEKFCETTIGSKNKEHGLLFKELLQTPNFRITVVEDADTV 200

  Fly   199 EICSTLRNIIAFAAGCSDGMELNENTKGGIIRRGFLEMLQFVDVFYPG-CRMGTFFESCGISDLV 262
            |:|..|:||:|.|||..||:...:|||..:||.|.:||:.|.:||..| ..:.||.||||::||:
 Frog   201 ELCGALKNIVAVAAGFCDGLGCGDNTKAAVIRLGLMEMIAFANVFCKGPVSIATFLESCGVADLI 265

  Fly   263 TSCYANRNRKLAEAFVKTGKPLSELEHILIPGHEPLGPVTAELVHHMLKKKGLEDKFPLFTTVYR 327
            |:||..||||::|||||:||.:.|||..::.|.:..||.|:..|:.:|::|.:.:||||||.||:
 Frog   266 TTCYGGRNRKVSEAFVKSGKSIEELEKEMLNGQKLQGPQTSAEVYRILQQKNMVNKFPLFTAVYQ 330

  Fly   328 ICTGDYPLQRLVETLIKAREDIFHPLH 354
            ||....|::.::..|..      ||.|
 Frog   331 ICYEGKPVEDVISCLQS------HPEH 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpdh2NP_611760.2 glycerol3P_DH 6..342 CDD:274551 150/336 (45%)
gpd1lNP_989027.1 glycerol3P_DH 8..345 CDD:274551 150/337 (45%)

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