DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpdh2 and gpdh-2

DIOPT Version :10

Sequence 1:NP_611760.2 Gene:Gpdh2 / 37672 FlyBaseID:FBgn0034825 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_871632.1 Gene:gpdh-2 / 176399 WormBaseID:WBGene00010778 Length:392 Species:Caenorhabditis elegans


Alignment Length:360 Identity:164/360 - (45%)
Similarity:228/360 - (63%) Gaps:17/360 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ICIIGSGNWATTIARNVGRNVLN-SQTLDEKVPMYVYEEIVEGRKLTEIINTTHINSKYMPNFEL 69
            :.|||||||.:.|||.||....: ....|..|.|:|:||||.|.||:|:||..|.|.||:|...|
 Worm    38 VTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEEIVNGEKLSEVINNRHENIKYLPGKVL 102

  Fly    70 PPNIVAVDDIVTTARDADIIIFAIPPTFVSSCCKTLLGKVKPTAHAVSLIKG--FERGDD----- 127
            |.|:|||.|:|.:...:::::|.:|..||...|:.|:||:.....|:|||||  |::.:.     
 Worm   103 PNNVVAVTDLVESCEGSNVLVFVVPHQFVKGICEKLVGKIPADTQAISLIKGISFDKTNQGVSTE 167

  Fly   128 --GQFVLISQIIMRQLKIPCSVLVGCNLAHELAHDHFAEGTVGC-RDQKYYRVLHDIFKSPTFRV 189
              |...|||:.|...|||..|||:|.|||.|:|:|:|.|.|:|| |..:...:|..:|.:..||:
 Worm   168 KRGGLKLISEEIKEILKIEVSVLMGANLAPEVANDNFCEATIGCKRKAEDGPLLKKLFHTDNFRI 232

  Fly   190 VVTEDADCVEICSTLRNIIAFAAGCSDGMELNENTKGGIIRRGFLEMLQFVDVFYPGCRMGTFFE 254
            .|.|||..||:|..|:|::|.|||.:||:...:|||..:||.|.:|..:||:.:|||..:.||||
 Worm   233 NVVEDAHTVELCGALKNVVACAAGFTDGLGYGDNTKAAVIRLGLMETTKFVEHYYPGSNLQTFFE 297

  Fly   255 SCGISDLVTSCYANRNRKLAEAFVKTGKPLSELEHILIPGHEPLGPVTAELVHHMLKKKGLEDKF 319
            ||||:||:|:||..||||:.||||||||.::|:|..|:.|....||:|||.|:.|:.|.||:.||
 Worm   298 SCGIADLITTCYGGRNRKVCEAFVKTGKSMAEVEKELLNGQSAQGPLTAEEVYLMMHKTGLDAKF 362

  Fly   320 PLFTTVYRICTGDYPLQRLVETLIKAREDIFHPLH 354
            ||||.|::||.|:.....||:.|..      ||.|
 Worm   363 PLFTAVHKICAGEMKPAELVDCLRN------HPEH 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpdh2NP_611760.2 glycerol3P_DH 6..342 CDD:274551 160/346 (46%)
gpdh-2NP_871632.1 glycerol3P_DH 37..385 CDD:274551 160/346 (46%)

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