DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL37b and KCNQ4

DIOPT Version :9

Sequence 1:NP_611757.1 Gene:RpL37b / 37669 FlyBaseID:FBgn0034822 Length:89 Species:Drosophila melanogaster
Sequence 2:NP_004691.2 Gene:KCNQ4 / 9132 HGNCID:6298 Length:695 Species:Homo sapiens


Alignment Length:67 Identity:18/67 - (26%)
Similarity:21/67 - (31%) Gaps:24/67 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RRCGNSSYHL------QKSKCSQCGYPAAKTR-SFNWSRKAKGRKAQGTGRMRYLKNLRRRFRNG 77
            ||.|.|..||      ......|.|...:.|: ..:||                 .|.|.|||..
Human   447 RRTGPSKQHLAPPTMPTSPSSEQVGEATSPTKVQKSWS-----------------FNDRTRFRAS 494

  Fly    78 LR 79
            ||
Human   495 LR 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL37bNP_611757.1 PTZ00073 1..89 CDD:240257 18/67 (27%)
KCNQ4NP_004691.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
MIG-14_Wnt-bd <92..190 CDD:284153
Ion_trans 126..330 CDD:278921
Ion_trans_2 246..320 CDD:285168
Selectivity filter. /evidence=ECO:0000250 283..288
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..480 9/32 (28%)
KCNQ_channel 474..653 CDD:281513 10/40 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 496..515 1/1 (100%)
A-domain (Tetramerization) 546..650
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 587..606
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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