DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL37-2 and kcnc4

DIOPT Version :10

Sequence 1:NP_611757.1 Gene:RpL37-2 / 37669 FlyBaseID:FBgn0034822 Length:89 Species:Drosophila melanogaster
Sequence 2:NP_001182125.1 Gene:kcnc4 / 799410 ZFINID:ZDB-GENE-060503-773 Length:603 Species:Danio rerio


Alignment Length:24 Identity:8/24 - (33%)
Similarity:13/24 - (54%) Gaps:2/24 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SFGKRHNKTHTICRRCGNSSYHLQ 30
            :|.:.||  ||..:...||:..:|
Zfish   230 AFFEFHN--HTDTKSATNSTTIIQ 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL37-2NP_611757.1 PTZ00073 1..89 CDD:240257 8/24 (33%)
kcnc4NP_001182125.1 amino terminal assembly domain 1..206
Potassium_chann 1..29 CDD:431870
BTB_KCNC2_4 35..151 CDD:349722
Ion_trans 205..461 CDD:459842 8/24 (33%)
S1-S6 membrane domain 207..516 8/24 (33%)
post S6 proximal carboxyl terminal domain 517..581
distal carboxyl terminus 582..603
Blue background indicates that the domain is not in the aligned region.

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